111 Publications (Page 1 of 5)
2021
A single-cell atlas of the healthy breast tissues reveals clinically relevant clusters of breast epithelial cells.
Bhat-Nakshatri, PoornimaBhat-Nakshatri, PoornimaBhat-Nakshatri, PoornimaBhat-Nakshatri, PoornimaBhat-Nakshatri, PoornimaGao, HongyuGao, HongyuGao, HongyuGao, HongyuGao, HongyuSheng, LiuSheng, LiuSheng, LiuSheng, LiuSheng, LiuMcGuire, Patrick CMcGuire, Patrick CMcGuire, Patrick CMcGuire, Patrick CMcGuire, Patrick CXuei, XiaolingXuei, XiaolingXuei, XiaolingXuei, XiaolingXuei, XiaolingWan, JunWan, JunWan, JunWan, JunWan, JunLiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongAlthouse, Sandra KAlthouse, Sandra KAlthouse, Sandra KAlthouse, Sandra KAlthouse, Sandra KColter, AustynColter, AustynColter, AustynColter, AustynColter, AustynSandusky, GeorgeSandusky, GeorgeSandusky, GeorgeSandusky, GeorgeSandusky, GeorgeStorniolo, Anna MariaStorniolo, Anna MariaStorniolo, Anna MariaStorniolo, Anna MariaStorniolo, Anna MariaNakshatri, HarikrishnaNakshatri, HarikrishnaNakshatri, HarikrishnaNakshatri, Harikrishna and Nakshatri, Harikrishna
Cell reports. Medicine, vol. 2, (no. 3), pp. 100219, March 16, 2021. | Journal Article
 
Atractylenolide I enhances responsiveness to immune checkpoint blockade therapy by activating tumor antigen presentation.
Xu, H.Xu, HanchenXu, HanchenVan der Jeught, KevinVan Der Jeught, K.Van der Jeught, KevinZhou, ZhuolongZhou, ZhuolongZhou, Z.Zhang, LuZhang, L.Zhang, LuYu, TaoYu, TaoYu, T.Sun, YifanSun, Y.Sun, YifanLi, YujingLi, YujingLi, Y.Wan, ChanglinWan, ChanglinWan, C.So, KamanSo, K.M.So, KamanLiu, DegangLiu, D.Liu, DegangFrieden, MichaelFrieden, M.Frieden, MichaelFang, YuanzhangFang, Y.Fang, YuanzhangMosley, A.L.Mosley, Amber LMosley, Amber LHe, XiaomingHe, X.He, XiaomingZhang, XinnaZhang, XinnaZhang, X.Sandusky, George ESandusky, G.E.Sandusky, George ELiu, YunlongLiu, YunlongLiu, Y.Meroueh, S.O.Meroueh, Samy OMeroueh, Samy OZhang, ChiZhang, ChiZhang, C.Wijeratne, Aruna BWijeratne, A.B.Wijeratne, Aruna BHuang, ChengHuang, C.Huang, ChengJi, GuangJi, GuangJi, G.Lu, XiongbinLu, X. and Lu, Xiongbin
The Journal of clinical investigation, April 8, 2021. | Journal Article
 
MAL2 drives immune evasion in breast cancer by suppressing tumor antigen presentation
Fang, YuanzhangFang, YuanzhangFang, YuanzhangY, FangFang, YuanzhangWang, LifeiL, WangWang, LifeiWang, LifeiWang, LifeiC, WanWan, ChanglinWan, ChanglinWan, ChanglinWan, ChanglinSun, YifanSun, YifanY, SunSun, YifanSun, YifanJeught K, VanVAn der Jeught, KevinVAn der Jeught, KevinVAn der Jeught, KevinVAn der Jeught, KevinZhou, ZhuolongZ, ZhouZhou, ZhuolongZhou, ZhuolongZhou, ZhuolongDong, TianhanT, DongDong, TianhanDong, TianhanDong, TianhanSo, Ka MKM, SoSo, Ka MSo, Ka MSo, Ka MYu, TaoYu, TaoT, YuYu, TaoYu, TaoLi, YujingLi, YujingLi, YujingLi, YujingY, LiEyvani, HaniyehEyvani, HaniyehEyvani, HaniyehH, EyvaniEyvani, HaniyehColter, Austyn BColter, Austyn BColter, Austyn BColter, Austyn BAB, ColterDong, EdwardE, DongDong, EdwardDong, EdwardDong, EdwardCao, ShaCao, ShaCao, ShaCao, ShaS, CaoJ, WangWang, JinWang, JinWang, JinWang, JinBP, SchneiderSchneider, Bryan PSchneider, Bryan PSchneider, Bryan PSchneider, Bryan PSandusky, George ESandusky, George EX, ZhangSandusky, George ESandusky, George ELiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongZhang, ChiZhang, ChiZhang, ChiZhang, ChiLu, XiongbinLu, XiongbinLu, XiongbinLu, XiongbinZhang, XinnaZhang, XinnaZhang, Xinna and Zhang, Xinna
Journal of Clinical Investigation, vol. 131, (no. 1), pp. 1-17, Jan 2021. | Journal Article
 
QKI is a critical pre-mRNA alternative splicing regulator of cardiac myofibrillogenesis and contractile function
Liu, YingChen, XuLiu, ZhuoHuang, JieSimpson, EdSheng, WeiSanderson, MariaChen-Leng, CaiLi, XiaohuiYang, LeiLiu, YunlongHuang, Guoying and Sun, Ning
Nature Communications, vol. 12, (no. 1), 2021. | Journal Article
 
Tumor-derived IL-6 and trans-signaling among tumor, fat, and muscle mediate pancreatic cancer cachexia.
Rupert, Joseph EJE, RupertRupert, Joseph EA, NarasimhanNarasimhan, AshokNarasimhan, AshokJengelley, Daenique H ADHA, JengelleyJengelley, Daenique H AJiang, YanlinY, JiangJiang, YanlinJ, LiuLiu, JianguoLiu, JianguoAu, ErnieE, AuAu, ErnieSilverman, Libbie MLM, SilvermanSilverman, Libbie MSandusky, GeorgeG, SanduskySandusky, GeorgeA, BonettoBonetto, AndreaBonetto, AndreaCao, ShaS, CaoCao, ShaLu, XiaoyuX, LuLu, XiaoyuO'Connell, Thomas MO'Connell, Thomas MTM, O’ConnellLiu, YunlongY, LiuLiu, YunlongLG, KoniarisKoniaris, Leonidas GKoniaris, Leonidas GZimmers, Teresa AZimmers, Teresa A and TA, Zimmers
The Journal of experimental medicine, vol. 218, (no. 6), June 7, 2021. | Journal Article
2020
Breast Cancer Cell Detection and Characterization from Breast Milk-Derived Cells.
Bhat-Nakshatri, PoornimaKumar, BrijeshSimpson, EdLudwig, Kandice KCox, Mary LGao, HongyuLiu, Yunlong and Nakshatri, Harikrishna
Cancer research, vol. 80, (no. 21), pp. 4828-4839, November 1, 2020. | Journal Article
 
CNS-Native Myeloid Cells Drive Immune Suppression in the Brain Metastatic Niche through Cxcl10.
Guldner, Ian HGuldner, Ian HGuldner, Ian HGuldner, Ian HGuldner, Ian HWang, QingfeiWang, QingfeiWang, QingfeiWang, QingfeiWang, QingfeiYang, LinYang, LinYang, LinYang, LinYang, LinGolomb, Samantha MGolomb, Samantha MGolomb, Samantha MGolomb, Samantha MGolomb, Samantha MZhao, ZhuoZhao, ZhuoZhao, ZhuoZhao, ZhuoZhao, ZhuoLopez, Jacqueline ALopez, Jacqueline ALopez, Jacqueline ALopez, Jacqueline ALopez, Jacqueline ABrunory, AbigailBrunory, AbigailBrunory, AbigailBrunory, AbigailBrunory, AbigailHowe, Erin NHowe, Erin NHowe, Erin NHowe, Erin NHowe, Erin NZhang, YizheZhang, YizheZhang, YizheZhang, YizheZhang, YizhePalakurthi, BhavanaPalakurthi, BhavanaPalakurthi, BhavanaPalakurthi, BhavanaPalakurthi, BhavanaBarron, MartinBarron, MartinBarron, MartinBarron, MartinBarron, MartinGao, HongyuGao, HongyuGao, HongyuGao, HongyuGao, HongyuXuei, XiaolingXuei, XiaolingXuei, XiaolingXuei, XiaolingXuei, XiaolingLiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongLi, JunLi, JunLi, JunLi, JunLi, JunChen, Danny ZChen, Danny ZChen, Danny ZChen, Danny ZChen, Danny ZLandreth, Gary ELandreth, Gary ELandreth, Gary ELandreth, Gary ELandreth, Gary EZhang, SiyuanZhang, SiyuanZhang, SiyuanZhang, Siyuan and Zhang, Siyuan
Cell, vol. 183, (no. 5), pp. 1234-1248.e25, November 25, 2020. | Journal Article
 
Hair-bearing human skin generated entirely from pluripotent stem cells.
Lee, JiyoonRabbani, Cyrus CGao, HongyuSteinhart, Matthew RWoodruff, Benjamin MPflum, Zachary EKim, AlexanderHeller, StefanLiu, YunlongShipchandler, Taha Z and Koehler, Karl R
Nature, vol. 582, (no. 7812), pp. 399-404, June 2020. | Journal Article
 
Highly robust model of transcription regulator activity predicts breast cancer overall survival
Dong, ChuanpengDong, ChuanpengLiu, JiannanLiu, JiannanChen, Steven XChen, Steven XDong, TianhanDong, TianhanJiang, GuanglongJiang, GuanglongWang, YueWang, YueWu, HuanmeiWu, HuanmeiReiter, Jill LReiter, Jill LLiu, Yunlong and Liu, Yunlong
BMC medical genomics, vol. 13, (no. Suppl 5), pp. 49, 2020-Apr-03. | Journal Article
 
Single cell transcriptome profiling of the human alcohol-dependent brain.
Brenner, EricTiwari, Gayatri RKapoor, ManavLiu, YunlongBrock, Amy and Mayfield, R Dayne
Human molecular genetics, vol. 29, (no. 7), pp. 1144-1153, May 8, 2020. | Journal Article
2018
Genomic and Epigenomic Signatures in Ovarian Cancer Associated with Resensitization to Platinum Drugs
Fang, FangFang, FangFang, FangFang, FangCardenas, HoracioCardenas, HoracioCardenas, HoracioCardenas, HoracioHuang, HaoHuang, HaoHuang, HaoHuang, HaoJiang, GuanglongJiang, GuanglongPerkins, Susan MPerkins, Susan MPerkins, Susan MPerkins, Susan MZhang, ChiZhang, ChiZhang, ChiZhang, ChiKeer, Harold NKeer, Harold NKeer, Harold NKeer, Harold NLiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongNephew, Kenneth PNephew, Kenneth PNephew, Kenneth PNephew, Kenneth PMatei, DanielaMatei, DanielaMatei, Daniela and Matei, Daniela
Cancer research, vol. 78, (no. 3), pp. 644, 2018-02-01. | Journal Article
2017
Roles of alternative splicing in modulating transcriptional regulation
Li, JinWang, YangRao, XiWang, YueFeng, WeixingLiang, Hong and Liu, Yunlong
BMC Systems Biology, vol. 11, 2017. | Journal Article
 
Roles of alternative splicing in modulating transcriptional regulation.
Li, JinWang, YangRao, XiWang, YueFeng, WeixingLiang, Hong and Liu, Yunlong
BMC systems biology, vol. 11, pp. 89, October 3, 2017. | Journal Article
2016
High Resolution Genomic Scans Reveal Genetic Architecture Controlling Alcohol Preference in Bidirectionally Selected Rat Model
Lo, Chiao-LingLo, Chiao-LingLo, Chiao-LingLo, Chiao-LingLossie, Amy CLossie, Amy CLossie, Amy CLossie, Amy CLiang, TiebingLiang, TiebingLiang, TiebingLiang, TiebingLiu, YunlongLiu, YunlongLiu, YunlongLiu, YunlongXuei, XiaolingXuei, XiaolingXuei, XiaolingXuei, XiaolingLumeng, LawrenceLumeng, LawrenceLumeng, LawrenceLumeng, LawrenceZhou, Feng CZhou, Feng CZhou, Feng CZhou, Feng CMuir, William MMuir, William MMuir, William M and Muir, William M
PLoS genetics, vol. 12, (no. 8), pp. e1006178, 2016-08-00. | Journal Article
 
Identification of rifampin-regulated functional modules and related microRNAs in human hepatocytes based on the protein interaction network.
Li, JinWang, YingWang, LeiDai, XuefengCong, WangFeng, WeixingXu, ChengzhenDeng, YulinWang, YueSkaar, Todd CLiang, Hong and Liu, Yunlong
BMC genomics, vol. 17, pp. 517. | Journal Article
 
Rifampin Regulation of Drug Transporters Gene Expression and the Association of MicroRNAs in Human Hepatocytes.
Benson, Eric A.Benson, Eric ABenson, Eric AEadon, Michael TEadon, Michael T.Eadon, Michael TDesta, ZeruesenayDesta, ZeruesenayDesta, ZeruesenayLiu, YunlongLiu, YunlongLiu, YunlongLin, HaiLin, HaiLin, HaiBurgess, Kimberly SBurgess, Kimberly S.Burgess, Kimberly SSegar, Matthew WSegar, Matthew WSegar, Matthew W.Gaedigk, AndreaGaedigk, AndreaGaedigk, AndreaSkaar, Todd CSkaar, Todd C. and Skaar, Todd C
Frontiers in pharmacology, vol. 7, pp. 111, 2016. | Journal Article
2015
Understanding Transcription Factor Regulation by Integrating Gene Expression and DNase I Hypersensitive Sites
Wang, GuohuaWang, FangHuang, QianLi, YuLiu, Yunlong and Wang, Yadong
BioMed Research International, vol. 2015, pp. 7, 20150903. | Journal Article
2014
Characterizing the heterogeneity of triple-negative breast cancers using microdissected normal ductal epithelium and RNA-sequencing.
Radovich, MilanRadovich, MilanRadovich, MilanClare, Susan EClare, SusanClare, SusanAtale, RutujaAtale, RutujaAtale, RutujaPardo, IvanesaPardo, IvanesaPardo, IvanesaHancock, BradleyHancock, Bradley AHancock, BradleySolzak, JeffreySolzak, JeffreySolzak, Jeffrey PKassem, NawalKassem, NawalKassem, NawalMathieson, TheresaMathieson, TheresaMathieson, TheresaStorniolo, AnnaStorniolo, Anna MStorniolo, AnnaRufenbarger, ConnieRufenbarger, ConnieRufenbarger, ConnieLillemoe, HeatherLillemoe, HeatherLillemoe, Heather ABlosser, Rachel JBlosser, RachelBlosser, RachelChoi, Mi RChoi, MiChoi, MiSauder, CandiceSauder, Candice ASauder, CandiceDoxey, DianeDoxey, DianeDoxey, DianeHenry, JillHenry, JillHenry, Jill EHilligoss, EricHilligoss, EricHilligoss, Eric ESakarya, OnurSakarya, OnurSakarya, OnurHyland, FionaHyland, FionaHyland, Fiona CHickenbotham, MatthewHickenbotham, MatthewHickenbotham, MatthewZhu, JinZhu, JinZhu, JinGlasscock, JarretGlasscock, JarretGlasscock, JarretBadve, SunilBadve, SunilBadve, SunilIvan, MirceaIvan, MirceaIvan, MirceaLiu, YunlongLiu, YunlongLiu, YunlongSledge, George WSledge, GeorgeSledge, GeorgeSchneider, BryanSchneider, Bryan P and Schneider, Bryan
Breast cancer research and treatment, vol. 143, (no. 1), pp. 57-68, 2014/Jan. | Journal Article
 
Correcting imbalanced reads coverage in bacterial transcriptome sequencing with extreme deep coverage.
Zhang, XinjunGangaiah, DharaneshMunson, Robert SSpinola, Stanley M and Liu, Yunlong
International journal of computational biology and drug design, vol. 7, (no. 2-3), pp. 195-213, 2014. | Journal Article
 
Haemophilus ducreyi Hfq contributes to virulence gene regulation as cells enter stationary phase.
Gangaiah, DharaneshLabandeira-Rey, MariaZhang, XinjunFortney, Kate REllinger, SheilaZwickl, BethBaker, BethLiu, YunlongJanowicz, DianeKatz, Barry PBrautigam, Chad AMunson, Robert SHansen, Eric J and Spinola, Stanley M
mBio, vol. 5, (no. 1), pp. e01081-13, 2014. | Journal Article
 
Impact of human pathogenic micro-insertions and micro-deletions on post-transcriptional regulation
Zhang, XinjunLin, HaiZhao, HuiyingHao, YangyangMort, MatthewCooper, David NZhou, Yaoqi and Liu, Yunlong
Human Molecular Genetics, vol. 23, (no. 11), pp. 3034, 20140601. | Journal Article
 
Novel specific microRNA biomarkers in idiopathic inflammatory bowel disease unrelated to disease activity.
Lin, JingmeiWelker, Noah CZhao, ZijinLi, YongZhang, JianjunReuss, Sarah AZhang, XinjunLee, HwajeongLiu, Yunlong and Bronner, Mary P
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc, vol. 27, (no. 4), pp. 602-8, 2014/Apr. | Journal Article
2013
Activation of CpxRA in Haemophilus ducreyi primarily inhibits the expression of its targets, including major virulence determinants.
Gangaiah, DharaneshZhang, XinjunFortney, Kate RBaker, BethLiu, YunlongMunson, Robert S and Spinola, Stanley M
Journal of bacteriology, vol. 195, (no. 15), pp. 3486-502, 2013/Aug. | Journal Article
 
Amplification of distant estrogen response elements deregulates target genes associated with tamoxifen resistance in breast cancer.
Hsu, Pei-YinHsu, Hang-KaiLan, XunJuan, LiranYan, Pearlly SLabanowska, JadwigaHeerema, NylaHsiao, Tzu-HungChiu, Yu-ChiaoChen, YidongLiu, YunlongLi, LangLi, RongThompson, Ian MNephew, KenSharp, Zelton DKirma, Nameer BJin, Victor and Huang, Tim H
Cancer cell, vol. 24, (no. 2), pp. 197-212, 2013/Aug/12. | Journal Article
 
Comprehensive genomic profiling in diabetic nephropathy reveals the predominance of proinflammatory pathways.
Kelly, Katherine JLiu, YunlongZhang, JizhongGoswami, ChirayuLin, Hai and Dominguez, Jesus H
Physiological genomics, vol. 45, (no. 16), pp. 710-9, 2013/Aug/15. | Journal Article