111 Publications (Page 2 of 5)
2013
COPI transport complexes bind to specific RNAs in neuronal cells.
Todd, Adrian G⋅Todd, A.G.⋅Lin, H.⋅Lin, Hai⋅Ebert, A.D.⋅Ebert, Allison D⋅Liu, Y.⋅Liu, Yunlong⋅Androphy, E.J. and Androphy, Elliot J
Human molecular genetics, vol. 22, (no. 4), pp. 729-36, 2013/Feb/15. | Journal Article
 
DDIG-in: discriminating between disease-associated and neutral non-frameshifting micro-indels
Zhao, Huiying⋅Yang, Yuedong⋅Lin, Hai⋅Zhang, Xinjun⋅Mort, Matthew⋅Cooper, David N⋅Liu, Yunlong and Zhou, Yaoqi
Genome Biology, vol. 14, (no. 3), pp. R23, 2013. | Journal Article
 
Identification of regulatory regions of bidirectional genes in cervical cancer
Wang, Guohua⋅Wang, Guohua⋅Qi, Ke⋅Qi, Ke⋅Zhao, Yuming⋅Zhao, Yuming⋅Li, Yu⋅Li, Yu⋅Juan, Liran⋅Juan, Liran⋅Teng, Mingxiang⋅Teng, Mingxiang⋅Li, Lang⋅Li, Lang⋅Liu, Yunlong⋅Liu, Yunlong⋅Wang, Yadong and Wang, Yadong
BMC Medical Genomics, vol. 6, (no. Suppl 1), pp. S5, 2013. | Journal Article
 
Identification of regulatory regions of bidirectional genes in cervical cancer.
Wang, Guohua⋅Qi, Ke⋅Zhao, Yuming⋅Li, Yu⋅Juan, Liran⋅Teng, Mingxiang⋅Li, Lang⋅Liu, Yunlong and Wang, Yadong
BMC medical genomics, vol. 6 Suppl 1, pp. S5, 2013. | Journal Article
 
New aQTL SNPs for the CYP2D6 identified by a novel mediation analysis of genome-wide SNP arrays, gene expression arrays, and CYP2D6 activity.
Jiang, Guanglong⋅Chakraborty, Arindom⋅Wang, Zhiping⋅Boustani, Malaz⋅Liu, Yunlong⋅Skaar, Todd C and Li, Lang
BioMed research international, vol. 2013, pp. 493019, 2013. | Journal Article
 
NGSUtils: a software suite for analyzing and manipulating next-generation sequencing datasets.
Breese, Marcus R and Liu, Yunlong
Bioinformatics (Oxford, England), vol. 29, (no. 4), pp. 494-6, 2013/Feb/15. | Journal Article
 
Potential roles of microRNAs in regulating long intergenic noncoding RNAs
Juan, Liran⋅Juan, Liran⋅Wang, Guohua⋅Wang, Guohua⋅Radovich, Milan⋅Radovich, Milan⋅Schneider, Bryan P⋅Schneider, Bryan P⋅Clare, Susan E⋅Clare, Susan E⋅Wang, Yadong⋅Wang, Yadong⋅Liu, Yunlong and Liu, Yunlong
BMC Medical Genomics, vol. 6, (no. Suppl 1), pp. S7, 2013. | Journal Article
 
Potential roles of microRNAs in regulating long intergenic noncoding RNAs.
Juan, Liran⋅Wang, Guohua⋅Radovich, Milan⋅Schneider, Bryan P⋅Clare, Susan E⋅Wang, Yadong and Liu, Yunlong
BMC medical genomics, vol. 6 Suppl 1, pp. S7, 2013. | Journal Article
 
Regulation of microRNA expression by rifampin in human hepatocytes.
Ramamoorthy, Anuradha⋅Ramamoorthy, Anuradha⋅Liu, Yunlong⋅Liu, Yunlong⋅Philips, Santosh⋅Philips, Santosh⋅Desta, Zeruesenay⋅Desta, Zeruesenay⋅Lin, Hai⋅Lin, Hai⋅Goswami, Chirayu⋅Goswami, Chirayu⋅Gaedigk, Andrea⋅Gaedigk, Andrea⋅Li, Lang⋅Li, Lang⋅Flockhart, David A⋅Flockhart, David A⋅Skaar, Todd C and Skaar, Todd C
Drug metabolism and disposition: the biological fate of chemicals, vol. 41, (no. 10), pp. 1763-8, 2013/Oct. | Journal Article
2012
A dynamic time order network for time-series gene expression data analysis
Zhang, Pengyue⋅Zhang, Pengyue⋅Mourad, Raphaeel⋅Mourad, Raphaël⋅Xiang, Yang⋅Xiang, Yang⋅Huang, Kun⋅Huang, Kun⋅Huang, Tim⋅Huang, Tim H⋅Nephew, Kenneth⋅Nephew, Ken⋅Liu, Yunlong⋅Liu, Yunlong⋅Li, Lang and Li, Lang
BMC Systems Biology, vol. 6, (no. Suppl 3), pp. S9, 2012. | Journal Article
 
A dynamic time order network for time-series gene expression data analysis.
Zhang, Pengyue⋅Mourad, Raphael⋅Xiang, Yang⋅Huang, Kun⋅Huang, Tim H⋅Nephew, Ken⋅Liu, Yunlong and Li, Lang
BMC systems biology, vol. 6 Suppl 3, pp. S9, 2012. | Journal Article
 
Alt Event Finder: a tool for extracting alternative splicing events from RNA-seq data
Zhou, Ao⋅Breese, Marcus R⋅Hao, Yangyang⋅Edenberg, Howard J⋅Li, Lang⋅Skaar, Todd and Liu, Yunlong
BMC Genomics, vol. 13, (no. Suppl 8), pp. S10, 2012. | Journal Article
 
Alt Event Finder: a tool for extracting alternative splicing events from RNA-seq data.
Zhou, Ao⋅Breese, Marcus R⋅Hao, Yangyang⋅Edenberg, Howard J⋅Li, Lang⋅Skaar, Todd C and Liu, Yunlong
BMC genomics, vol. 13 Suppl 8, pp. S10, 2012. | Journal Article
 
A modulator based regulatory network for ER alpha ] signaling pathway
Wu, Heng-Yi⋅Wu, Heng-Yi⋅Zheng, Pengyue⋅Zheng, Pengyue⋅Jiang, Guanglong⋅Jiang, Guanglong⋅Liu, Yunlong⋅Liu, Yunlong⋅Nephew, Ken⋅Nephew, Kenneth P⋅Huang, Tim H M⋅Huang, Tim H⋅Li, Lang and Li, Lang
BMC Genomics, vol. 13, (no. Suppl 6), pp. S6, 2012. | Journal Article
 
A modulator based regulatory network for ERα signaling pathway.
Wu, Heng-Yi⋅Zheng, Pengyue⋅Jiang, Guanglong⋅Liu, Yunlong⋅Nephew, Ken⋅Huang, Tim H and Li, Lang
BMC genomics, vol. 13 Suppl 6, pp. S6, 2012. | Journal Article
 
Empirical bayes model comparisons for differential methylation analysis.
Teng, Mingxiang⋅Teng, Mingxiang⋅Wang, Yadong⋅Wang, Yadong⋅Kim, Seongho⋅Kim, Seongho⋅Li, Lang⋅Li, Lang⋅Shen, Changyu⋅Shen, Changyu⋅Wang, Guohua⋅Wang, Guohua⋅Liu, Yunlong⋅Liu, Yunlong⋅Huang, Tim H⋅Huang, Tim H M⋅Nephew, Kenneth P⋅Nephew, Ken⋅Balch, Curt and Balch, Curt
Comparative and functional genomics, vol. 2012, pp. 376706, 2012. | Journal Article
 
Induced Mist1 expression promotes remodeling of mouse pancreatic acinar cells.
Direnzo, Daniel⋅Hess, David A⋅Damsz, Barbara⋅Hallett, Judy E⋅Marshall, Brett⋅Goswami, Chirayu⋅Liu, Yunlong⋅Deering, Tye⋅Mac Donald, Raymond J and Konieczny, Stephen F
Gastroenterology, vol. 143, (no. 2), pp. 469-80, 2012/Aug. | Journal Article
 
Regulatory mechanisms in bone following mechanical loading.
Mantila Roosa, Sara M⋅Turner, Charles H and Liu, Yunlong
Gene regulation and systems biology, vol. 6, pp. 43-53, 2012. | Journal Article
 
Regulatory Mechanisms in Bone Following Mechanical Loading
Roosa, Sara M⋅Turner, Charles H and Liu, Yunlong
Gene Regulation and Systems Biology, vol. 6, pp. 43-53, 2012. | Journal Article
 
The influence of cis-regulatory elements on DNA methylation fidelity.
Teng, Mingxiang⋅Teng, Mingxiang⋅Balch, Curtis⋅Balch, Curt⋅Liu, Yunlong⋅Liu, Yunlong⋅Li, Meng⋅Li, Meng⋅Huang, Tim H⋅Huang, Tim H M⋅Wang, Yadong⋅Wang, Yadong⋅Nephew, Ken⋅Nephew, Kenneth P⋅Li, Lang and Li, Lang
PloS one, vol. 7, (no. 3), pp. e32928, 2012. | Journal Article
2011
Alcohol Alters DNA Methylation Patterns and Inhibits Neural Stem Cell Differentiation
Zhou, Feng C⋅Balaraman, Yokesh⋅Teng, MingXiang⋅Liu, Yunlong⋅Singh, Rabindra P and Nephew, Ken
Alcoholism: Clinical and Experimental Research, vol. 35, (no. 4), pp. 735-746, 2011. | Journal Article
 
Alteration of gene expression by alcohol exposure at early neurulation.
Zhou, Feng C⋅Zhou, Feng C⋅Zhao, Qianqian⋅Zhao, Qianqian⋅Liu, Yunlong⋅Liu, Yunlong⋅Goodlett, Charles R⋅Goodlett, Charles R⋅Liang, Tiebing⋅Liang, Tiebing⋅McClintick, Jeanette N⋅McClintick, Jeanette N⋅Edenberg, Howard J⋅Edenberg, Howard J⋅Li, Lang and Li, Lang
BMC genomics, vol. 12, pp. 124, 2011. | Journal Article
 
Alternative splicing in bone following mechanical loading.
Mantila Roosa, Sara M⋅Liu, Yunlong and Turner, Charles H
Bone, vol. 48, (no. 3), pp. 543-551, March 1, 2011. | Journal Article
 
A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.
Shen, Changyu⋅Huang, Yiwen⋅Liu, Yunlong⋅Wang, Guohua⋅Zhao, Yuming⋅Wang, Zhiping⋅Teng, Mingxiang⋅Wang, Yadong⋅Flockhart, David A⋅Skaar, Todd C⋅Yan, Pearlly⋅Nephew, Ken⋅Huang, Tim H and Li, Lang
BMC systems biology, vol. 5, (no. 1), pp. 67, 2011. | Journal Article
 
Analysis of exome sequences with and without incorporating prior biological knowledge
Namkung, Junghyun⋅Raska, Paola⋅Kang, Jia⋅Liu, Yunlong⋅Lu, Qing and Zhu, Xiaofeng
Genetic Epidemiology, vol. 35, (no. Supplement1), pp. S48-S55, 2011. | Journal Article