167 Publications (Page 3 of 7)
2016
Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation.
Pease, James B⋅Haak, David C⋅Hahn, Matthew W and Moyle, Leonie C
PLoS biology, vol. 14, (no. 2), pp. e1002379, February 2016. | Journal Article
 
Powerful methods for detecting introgressed regions from population genomic data.
Rosenzweig, Benjamin K⋅Pease, James B⋅Besansky, Nora J and Hahn, Matthew W
Molecular ecology, vol. 25, (no. 11), pp. 2387-2397, June 2016. | Journal Article
 
Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes.
Hall, Andrew Brantley⋅Papathanos, Philippos-Aris⋅Sharma, Atashi⋅Cheng, Changde⋅Akbari, Omar S⋅Assour, Lauren⋅Bergman, Nicholas H⋅Cagnetti, Alessia⋅Crisanti, Andrea⋅Dottorini, Tania⋅Fiorentini, Elisa⋅Galizi, Roberto⋅Hnath, Jonathan⋅Jiang, Xiaofang⋅Koren, Sergey⋅Nolan, Tony⋅Radune, Diane⋅Sharakhova, Maria V⋅Steele, Aaron⋅Timoshevskiy, Vladimir A⋅Windbichler, Nikolai⋅Zhang, Simo⋅Hahn, Matthew W⋅Phillippy, Adam M⋅Emrich, Scott J⋅Sharakhov, Igor V⋅Tu, Zhijian Jake and Besansky, Nora J
Proceedings of the National Academy of Sciences of the United States of America, vol. 113, (no. 15), pp. E2114-E2123, April 12, 2016. | Journal Article
 
Reticulate evolutionary history and extensive introgression in mosquito species revealed by phylogenetic network analysis.
Wen, Dingqiao⋅Yu, Yun⋅Hahn, Matthew W and Nakhleh, Luay
Molecular ecology, vol. 25, (no. 11), pp. 2361-2372, June 2016. | Journal Article
2015
Convergent evolution of the genomes of marine mammals.
Foote, Andrew D⋅Liu, Yue⋅Thomas, Gregg W C⋅Vinař, Tomáš⋅Alföldi, Jessica⋅Deng, Jixin⋅Dugan, Shannon⋅van Elk, Cornelis E⋅Hunter, Margaret E⋅Joshi, Vandita⋅Khan, Ziad⋅Kovar, Christie⋅Lee, Sandra L⋅Lindblad-Toh, Kerstin⋅Mancia, Annalaura⋅Nielsen, Rasmus⋅Qin, Xiang⋅Qu, Jiaxin⋅Raney, Brian J⋅Vijay, Nagarjun⋅Wolf, Jochen B W⋅Hahn, Matthew W⋅Muzny, Donna M⋅Worley, Kim C⋅Gilbert, M Thomas P and Gibbs, Richard A
Nature genetics, vol. 47, (no. 3), pp. 272-275, March 2015. | Journal Article
 
Detection and Polarization of Introgression in a Five-Taxon Phylogeny.
Pease, James B and Hahn, Matthew W
Systematic biology, vol. 64, (no. 4), pp. 651-662, July 2015. | Journal Article
 
Determining the Null Model for Detecting Adaptive Convergence from Genomic Data: A Case Study using Echolocating Mammals.
Thomas, Gregg W C and Hahn, Matthew W
Molecular biology and evolution, vol. 32, (no. 5), pp. 1232-1236, May 2015. | Journal Article
 
Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes
Neafsey, D.E.⋅...⋅Oshaghi, M. A⋅...⋅Neafsey, Daniel E⋅Neafsey, Daniel E⋅Chauve, C⋅Waterhouse, Robert M⋅Waterhouse, Robert M⋅Waterhouse, R.M.⋅Maccallum, R. M⋅Abai, Mohammad R⋅Abai, M.R.⋅Abai, Mohammad R⋅Aganezov, S.S.⋅Aganezov, Sergey S⋅Kemppainen, P⋅Aganezov, Sergey S⋅Kennedy, R. C⋅Alekseyev, M.A.⋅Alekseyev, Max A⋅Alekseyev, Max A⋅Allen, J.E.⋅Allen, James E⋅Christophides, G. K⋅Allen, James E⋅Amon, J.⋅Amon, James⋅Tubio, J. M⋅Amon, James⋅Arcà, B.⋅Arcà, Bruno⋅Arcà, Bruno⋅Simard, F⋅Arensburger, Peter⋅Thomas, G. W⋅Arensburger, P.⋅Arensburger, Peter⋅Ribeiro, J. M⋅Artemov, Gleb⋅Artemov, G.⋅Artemov, Gleb⋅Assour, Lauren A⋅Assour, L.A.⋅Assour, Lauren A⋅Artemov, G⋅Zdobnov, E. M⋅Basseri, H.⋅Basseri, Hamidreza⋅Basseri, Hamidreza⋅Berlin, Aaron⋅Aganezov, S. S⋅Berlin, A.⋅Berlin, Aaron⋅Birren, B.W.⋅Birren, Bruce W⋅Birren, Bruce W⋅Blandin, Stephanie A⋅Novoa, E. M⋅Blandin, Stephanie A⋅Blandin, S.A.⋅Brockman, A.I.⋅Brockman, Andrew I⋅Fontaine, M. C⋅Brockman, Andrew I⋅Burkot, Thomas R⋅Burkot, Thomas R⋅Burkot, T.R.⋅Simao, F. A⋅Burt, Austin⋅Burt, Austin⋅Pakpour, N⋅Burt, A.⋅Chan, Clara S⋅Louis, C⋅Chan, Clara S⋅Chan, C.S.⋅Chauve, Cedric⋅Berlin, A⋅Chauve, Cedric⋅Chauve, C.⋅Chiu, J.C.⋅Chiu, Joanna C⋅Sharakhova, M. V⋅Chiu, Joanna C⋅Christensen, Mikkel⋅Christensen, M.⋅Peery, A. N⋅Christensen, Mikkel⋅Costantini, Carlo⋅Hughes, D. S⋅Costantini, Carlo⋅Costantini, C.⋅Davidson, Victoria L M⋅Davidson, Victoria L M⋅Davidson, V.L.M.⋅Rajaraman, A⋅Deligianni, E.⋅Zhou, X⋅Deligianni, Elena⋅Deligianni, Elena⋅Hahn, M. W⋅Dottorini, T.⋅Dottorini, Tania⋅Dottorini, Tania⋅Dritsou, Vicky⋅Papathanos, P. A⋅Dritsou, Vicky⋅Dritsou, V.⋅Rokas, A⋅Gabriel, S.B.⋅Gabriel, Stacey B⋅Gabriel, Stacey B⋅Yan, G⋅Guelbeogo, W.M.⋅Guelbeogo, Wamdaogo M⋅Guelbeogo, Wamdaogo M⋅Hall, A.B.⋅Hall, Andrew B⋅Hall, Andrew B⋅Emrich, S. J⋅Han, Mira V⋅Catteruccia, F⋅Han, M.V.⋅Han, Mira V⋅Hlaing, T.⋅Amon, J⋅Hlaing, Thaung⋅Hlaing, Thaung⋅Hughes, Daniel S T⋅Chiu, J. C⋅Hughes, D.S.T.⋅Hughes, Daniel S T⋅Jenkins, A.M.⋅Jenkins, Adam M⋅Jenkins, Adam M⋅Kirmitzoglou, I. K⋅Jiang, X.⋅Walton, C⋅Jiang, Xiaofang⋅Jiang, Xiaofang⋅Jungreis, Irwin⋅Jungreis, Irwin⋅Kakani, E. G⋅Jungreis, I.⋅Kakani, Evdoxia G⋅Kakani, E.G.⋅Kakani, Evdoxia G⋅Gelbart, W⋅Kamali, Maryam⋅Arensburger, P⋅Kamali, Maryam⋅Kamali, M.⋅Hall, A. B⋅Kemppainen, Petri⋅Kemppainen, Petri⋅Kemppainen, P.⋅Unger, M. F⋅Kennedy, Ryan C⋅Kennedy, R.C.⋅Kennedy, Ryan C⋅Assour, L. A⋅Kirmitzoglou, Ioannis K⋅Kirmitzoglou, Ioannis K⋅Kirmitzoglou, I.K.⋅Koekemoer, Lizette L⋅Koekemoer, Lizette L⋅Koekemoer, L.L.⋅Waterhouse, R. M⋅Laban, Njoroge⋅Laban, Njoroge⋅Kafatos, F. C⋅Laban, N.⋅Langridge, Nicholas⋅Donnelly, M. J⋅Langridge, Nicholas⋅Langridge, N.⋅Lawniczak, Mara K N⋅Lawniczak, Mara K N⋅Lawniczak, M.K.N.⋅Russell, T. L⋅Chan, C. S⋅Lirakis, M.⋅Lirakis, Manolis⋅Lirakis, Manolis⋅Mitchell, S. N⋅Lobo, N.F.⋅Lobo, Neil F⋅Lobo, Neil F⋅Lowy, Ernesto⋅Price, D. P⋅Lowy, Ernesto⋅Lowy, E.⋅MacCallum, Robert M⋅Cornman, R. S⋅MacCallum, R.M.⋅MacCallum, Robert M⋅Mao, Chunhong⋅Mao, Chunhong⋅Mao, C.⋅Michel, K⋅Maslen, Gareth⋅Maslen, G.⋅Povelones, M⋅Maslen, Gareth⋅Mbogo, C.⋅Mbogo, Charles⋅Lowy, E⋅Mbogo, Charles⋅Dottorini, T⋅McCarthy, Jenny⋅McCarthy, Jenny⋅McCarthy, J.⋅Allen, J. E⋅Michel, K.⋅Michel, Kristin⋅Michel, Kristin⋅Mitchell, Sara N⋅Nolan, T⋅Mitchell, S.N.⋅Mitchell, Sara N⋅Moore, W.⋅Vontas, J⋅Moore, Wendy⋅Moore, Wendy⋅Murphy, Katherine A⋅Basseri, H⋅Murphy, K.A.⋅Murphy, Katherine A⋅Naumenko, Anastasia N⋅Besansky, N. J⋅Naumenko, A.N.⋅Naumenko, Anastasia N⋅Nolan, Tony⋅Nolan, Tony⋅Mbogo, C⋅Nolan, T.⋅Novoa, Eva M⋅Novoa, Eva M⋅Christensen, M⋅Novoa, E.M.⋅Wilding, C. S⋅O'Loughlin, Samantha⋅O'Loughlin, Samantha⋅O'Loughlin, S.⋅Oringanje, Chioma⋅Oringanje, C.⋅Oringanje, Chioma⋅Hlaing, T⋅Oshaghi, M.A.⋅Slotman, M. A⋅Oshaghi, Mohammad A⋅Oshaghi, Mohammad A⋅Zwiebel, L. J⋅Pakpour, N.⋅Pakpour, Nazzy⋅Pakpour, Nazzy⋅Papathanos, Philippos A⋅Papathanos, P.A.⋅Kamali, M⋅Papathanos, Philippos A⋅Peery, A.N.⋅Peery, Ashley N⋅Sharakhov, I. V⋅Peery, Ashley N⋅Somboon, P⋅Povelones, M.⋅Povelones, Michael⋅Povelones, Michael⋅Prakash, A.⋅Prakash, Anil⋅Prakash, Anil⋅Topalis, P⋅Price, D.P.⋅Price, David P⋅Struchiner, C. J⋅Price, David P⋅Rajaraman, A.⋅Collins, F. H⋅Rajaraman, Ashok⋅Rajaraman, Ashok⋅Reimer, Lisa J⋅Reimer, Lisa J⋅Crisanti, A⋅Reimer, L.J.⋅Alekseyev, M. A⋅Rinker, David C⋅Rinker, David C⋅Rinker, D.C.⋅Rokas, Antonis⋅Rokas, Antonis⋅Rokas, A.⋅Lawson, D⋅Russell, T.L.⋅Russell, Tanya L⋅O'loughlin, S⋅Russell, Tanya L⋅Sagnon, N'Fale⋅Lobo, N. F⋅Sagnon, N'Fale⋅Sagnon, N.⋅Sharakhova, M.V.⋅Sharakhova, Maria V⋅Sharakhova, Maria V⋅Koekemoer, L. L⋅Shea, T.⋅Rinker, D. C⋅Shea, Terrance⋅Shea, Terrance⋅Simão, Felipe A⋅Simão, Felipe A⋅Simão, F.A.⋅Hansen, I. A⋅Simard, Frederic⋅Stegniy, V⋅Simard, F.⋅Simard, Frederic⋅Slotman, M.A.⋅Slotman, Michel A⋅Lirakis, M⋅Slotman, Michel A⋅Somboon, Pradya⋅Abai, M. R⋅Somboon, P.⋅Somboon, Pradya⋅Stegniy, Vladimir⋅Stegniy, Vladimir⋅Stegniy, V.⋅Lawniczak, M. K⋅Struchiner, Claudio J⋅Struchiner, Claudio J⋅Burkot, T. R⋅Struchiner, C.J.⋅Thomas, Gregg W C⋅Thomas, Gregg W C⋅Thomas, G.W.C.⋅tsou, V⋅Tojo, Marta⋅Shea, T⋅Tojo, Marta⋅Tojo, M.⋅Tojo, M⋅Topalis, Pantelis⋅Topalis, Pantelis⋅Topalis, P.⋅Tubio, José M C⋅Jungreis, I⋅Tubio, José M C⋅Tubio, J.M.C.⋅Han, M. V⋅Unger, Maria F⋅Unger, M.F.⋅Unger, Maria F⋅Vontas, J.⋅Vontas, John⋅Vontas, John⋅Blandin, S. A⋅Naumenko, A. N⋅Walton, Catherine⋅Walton, Catherine⋅Walton, C.⋅Sagnon, N⋅Wilding, Craig S⋅Wilding, Craig S⋅Wilding, C.S.⋅Willis, Judith H⋅Willis, Judith H⋅Willis, J.H.⋅Wu, Yi-Chieh⋅Wu, Y.-C.⋅Wu, Yi-Chieh⋅Gabriel, S. B⋅Yan, Guiyun⋅Howell, P. I⋅Yan, Guiyun⋅Yan, G.⋅Costantini, C⋅Zdobnov, E.M.⋅Zdobnov, Evgeny M⋅Zdobnov, Evgeny M⋅Zhou, Xiaofan⋅Zhou, Xiaofan⋅Murphy, K. A⋅Zhou, X.⋅Reimer, L. J⋅Catteruccia, F.⋅Catteruccia, Flaminia⋅Catteruccia, Flaminia⋅Christophides, George K⋅Brockman, A. I⋅Christophides, George K⋅Christophides, G.K.⋅Collins, Frank H⋅Collins, F.H.⋅Collins, Frank H⋅Arca, B⋅Neafsey, D. E⋅Cornman, Robert S⋅Cornman, R.S.⋅Cornman, Robert S⋅Crisanti, A.⋅...⋅Donnelly, M.J.⋅Emrich, S.J.⋅Fontaine, M.C.⋅Gelbart, W.⋅Hahn, M.W.⋅Hansen, I.A.⋅Howell, P.I.⋅Kafatos, F.C.⋅Kellis, M.⋅Lawson, D.⋅Louis, C.⋅Luckhart, S.⋅Muskavitch, M.A.T.⋅Ribeiro, J.M.⋅Riehle, M.A.⋅Sharakhov, I.V.⋅Tu, Z.⋅Zwiebel, L.J. and Besansky, N.J.
Science, vol. 347. | Journal Article
 
Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics.
Fontaine, Michael C⋅Pease, James B⋅Steele, Aaron⋅Waterhouse, Robert M⋅Neafsey, Daniel E⋅Sharakhov, Igor V⋅Jiang, Xiaofang⋅Hall, Andrew B⋅Catteruccia, Flaminia⋅Kakani, Evdoxia⋅Mitchell, Sara N⋅Wu, Yi-Chieh⋅Smith, Hilary A⋅Love, R Rebecca⋅Lawniczak, Mara K⋅Slotman, Michel A⋅Emrich, Scott J⋅Hahn, Matthew W and Besansky, Nora J
Science (New York, N.Y.), vol. 347, (no. 6217), pp. 1258524, January 2, 2015. | Journal Article
 
[Not Available].
Hahn, M
Der Hautarzt; Zeitschrift für Dermatologie, Venerologie, und verwandte Gebiete, vol. 66, (no. 11), pp. 883, November 2015. | Journal Article
 
Proteomic evidence for in-frame and out-of-frame alternatively spliced isoforms in human and mouse.
Ramalho, Rodrigo⋅Li, Sujun⋅Radivojac, Predrag and Hahn, Matthew
IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM, September 18, 2015. | Journal Article
 
Revisiting classic clines in Drosophila melanogaster in the age of genomics.
Adrion, Jeffrey R⋅Hahn, Matthew W and Cooper, Brandon S
Trends in genetics : TIG, vol. 31, (no. 8), pp. 434-444, August 2015. | Journal Article
 
Similar Efficacies of Selection Shape Mitochondrial and Nuclear Genes in Both Drosophila melanogaster and Homo sapiens.
Cooper, Brandon S⋅Burrus, Chad R⋅Ji, Chao⋅Hahn, Matthew W and Montooth, Kristi L
G3 (Bethesda, Md.), vol. 5, (no. 10), pp. 2165-2176, October 2015. | Journal Article
 
Soft Shoulders Ahead: Spurious Signatures of Soft and Partial Selective Sweeps Result from Linked Hard Sweeps
Schrider, Daniel⋅Schrider, Daniel R⋅Mendes, Fábio⋅Mendes, Fábio K⋅Hahn, Matthew⋅Hahn, Matthew W⋅Kern, Andrew and Kern, Andrew D
Genetics, vol. 200, (no. 1), pp. 267-13SI, May 2015. | Journal Article
 
The genome of the vervet (Chlorocebus aethiops sabaeus).
Warren, Wesley C⋅Warren, Wesley C⋅Warren, W.C.⋅Warren, Wesley C.⋅Jasinska, A.J.⋅Jasinska, Anna J⋅Jasinska, Anna J.⋅Jasinska, Anna J⋅García-Pérez, R.⋅García-Pérez, Raquel⋅Garcia-Perez, Raquel⋅García-Pérez, Raquel⋅Svardal, Hannes⋅Svardal, H.⋅Svardal, Hannes⋅Svarda, Hannes⋅Tomlinson, C.⋅Tomlinson, Chad⋅Tomlinson, Chad⋅Tomlinson, Chad⋅Rocchi, M.⋅Rocchi, Mariano⋅Rocchi, Mariano⋅Rocchi, Mariano⋅Archidiacono, N.⋅Archidiacono, Nicoletta⋅Archidiacono, Nicoletta⋅Archidiacono, Nicoletta⋅Capozzi, Oronzo⋅Capozzi, Oronzo⋅Capozzi, O.⋅Capozzi, Oronzo⋅Minx, Patrick⋅Minx, Patrick⋅Minx, Patrick⋅Minx, P.⋅Montague, M.J.⋅Montague, Michael J.⋅Montague, Michael J⋅Montague, Michael J⋅Kyung, Kim⋅Kyung, K.⋅Kyung, Kim⋅Kyung, Kim⋅Hillier, La Deana W⋅Hillier, L.W.⋅Hillier, LaDeana W⋅Hillier, LaDeana W.⋅Kremitzki, Milinn⋅Kremitzki, Milinn⋅Kremitzki, Milinn⋅Kremitzki, M.⋅Graves, Tina⋅Graves, T.⋅Graves, Tina⋅Graves, Tina⋅Chiang, Colby⋅Chiang, C.⋅Chiang, Colby⋅Chiang, Colby⋅Hughes, Jennifer⋅Hughes, J.⋅Hughes, Jennifer⋅Hughes, Jennifer⋅Tran, N.⋅Tran, Nam⋅Tran, Nam⋅Tran, Nam⋅Huang, Y.⋅Huang, Yu⋅Huang, Yu⋅Huang, Yu⋅Ramensky, Vasily⋅Ramensky, V.⋅Ramensky, Vasily⋅Ramensky, Vasily⋅Choi, Oi-Wa⋅Choi, Oi-wa⋅Choi, Oi-Wa⋅Choi, O.-W.⋅Jung, Yoon J.⋅Jung, Yoon J⋅Jung, Y.J.⋅Jung, Yoon J⋅Schmitt, Christopher A.⋅Schmitt, Christopher A⋅Schmitt, C.A.⋅Schmitt, Christopher A⋅Juretic, Nikoleta⋅Juretic, Nikoleta⋅Juretic, N.⋅Juretic, Nikoleta⋅Wasserscheid, Jessica⋅Wasserscheid, J.⋅Wasserscheid, Jessica⋅Wasserscheid, Jessica⋅Turner, Trudy R⋅Turner, Trudy R⋅Turner, Trudy R.⋅Turner, T.R.⋅Wiseman, Roger W⋅Wiseman, Roger W⋅Wiseman, Roger W.⋅Wiseman, R.W.⋅Tuscher, Jennifer J⋅Tuscher, Jennifer J⋅Tuscher, Jennifer J.⋅Tuscher, J.J.⋅Karl, J.A.⋅Kar, Julie A.⋅Karl, Julie A⋅Karl, Julie A⋅Schmitz, Jörn E⋅Schmitz, Jörn E⋅Schmitz, J.E.⋅Schmitz, Joern E.⋅Zahn, R.⋅Zahn, Roland⋅Zahn, Roland⋅Zahn, Roland⋅O'Connor, David H⋅O'Connor, David H⋅O’Connor, D.H.⋅O’Connor, David H.⋅Redmond, Eugene⋅Redmond, E.⋅Redmond, Eugene⋅Redmond, Eugene⋅Nisbett, Alex⋅Nisbett, A.⋅Nisbett, Alex⋅Nisbett, Alex⋅Jacquelin, Béatrice⋅Jacquelin, Béatrice⋅Jacquelin, Beatrice⋅Jacquelin, B.⋅Müller-Trutwin, Michaela C⋅Müller-Trutwin, Michaela C⋅Mueller-Trutwin, Michaela C.⋅Müller-Trutwin, M.C.⋅Brenchley, Jason M.⋅Brenchley, J.M.⋅Brenchley, Jason M⋅Brenchley, Jason M⋅Dione, Michel⋅Dione, Michel⋅Dione, M.⋅Dione, Michel⋅Antonio, M.⋅Antonio, Martin⋅Antonio, Martin⋅Antonio, Martin⋅Schroth, Gary P⋅Schroth, G.P.⋅Schroth, Gary P⋅Schroth, Gary P.⋅Kaplan, Jay R⋅Kaplan, Jay R.⋅Kaplan, J.R.⋅Kaplan, Jay R⋅Jorgensen, Matthew J⋅Jorgensen, Matthew J.⋅Jorgensen, M.J.⋅Jorgensen, Matthew J⋅Thomas, Gregg W. C.⋅Thomas, Gregg W C⋅Thomas, G.W.C.⋅Thomas, Gregg W C⋅Hahn, Matthew W.⋅Hahn, M.W.⋅Hahn, Matthew W⋅Hahn, Matthew W⋅Raney, Brian J⋅Raney, B.J.⋅Raney, Brian J.⋅Raney, Brian J⋅Aken, Bronwen⋅Aken, Bronwen⋅Aken, Bronwen⋅Aken, B.⋅Nag, R.⋅Nag, Rishi⋅Nag, Rishi⋅Nag, Rishi⋅Schmitz, Juergen⋅Schmitz, Juergen⋅Schmitz, Juergen⋅Schmitz, J.⋅Churakov, G.⋅Churakov, Gennady⋅Churakov, Gennady⋅Churakov, Gennady⋅Noll, Angela⋅Noll, A.⋅Noll, Angela⋅Noll, Angela⋅Stanyon, Roscoe⋅Stanyon, R.⋅Stanyon, Roscoe⋅Stanyon, Roscoe⋅Webb, D.⋅Webb, David⋅Webb, David⋅Webb, David⋅Thibaud-Nissen, Francoise⋅Thibaud-Nissen, Francoise⋅Thibaud-Nissen, Francoise⋅Thibaud-Nissen, F.⋅Nordborg, Magnus⋅Nordborg, Magnus⋅Nordborg, Magnus⋅Nordborg, M.⋅Marques-Bonet, T.⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Dewar, Ken⋅Dewar, Ken⋅Dewar, K.⋅Dewar, Ken⋅Weinstock, George M⋅Weinstock, George M.⋅Weinstock, G.M.⋅Weinstock, George M⋅Wilson, Richard K.⋅Wilson, R.K.⋅Wilson, Richard K⋅Wilson, Richard K⋅Freimer, Nelson B⋅Freimer, Nelson B.⋅Freimer, Nelson B and Freimer, N.B.
Genome research, vol. 25, (no. 12), pp. 1921-1933, December 2015. | Journal Article
 
The limited contribution of reciprocal gene loss to increased speciation rates following whole-genome duplication.
Muir, Christopher D and Hahn, Matthew W
The American naturalist, vol. 185, (no. 1), pp. 70-86, January 2015. | Journal Article
2014
Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication.
Montague, Michael⋅Montague, Michael J⋅Montague, M.J.⋅Li, G.⋅Li, Gang⋅Li, Gang⋅Golfi, B.⋅Gandolfi, Barbara⋅Gandolfi, Barbara⋅Khan, Razib⋅Khan, Razib⋅Khan, R.⋅Aken, Bronwen⋅Aken, B.L.⋅Aken, Bronwen L⋅Searle, Steven M J⋅Searle, Steven⋅Searle, S.M.J.⋅Minx, Patrick⋅Minx, P.⋅Minx, Patrick⋅Hillier, LaDeana⋅Hillier, La Deana W⋅Hillier, L.W.⋅Koboldt, Daniel C⋅Koboldt, D.C.⋅Koboldt, Daniel⋅Davis, Brian W⋅Davis, Brian⋅Davis, B.W.⋅Driscoll, Carlos A⋅Driscoll, C.A.⋅Driscoll, Carlos⋅Barr, Christina⋅Barr, C.S.⋅Barr, Christina S⋅Blackistone, Kevin⋅Blackistone, Kevin⋅Blackistone, K.⋅Quilez, Javier⋅Quilez, Javier⋅Quilez, J.⋅Lorente-Galdos, Belen⋅Lorente-Galdos, Belen⋅Lorente-Galdos, B.⋅Marques-Bonet, T.⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Alkan, C.⋅Alkan, Can⋅Alkan, Can⋅Thomas, G.W.C.⋅Thomas, Gregg⋅Thomas, Gregg W C⋅Hahn, Matthew W⋅Hahn, Matthew⋅Hahn, M.W.⋅Menotti-Raymond, Marilyn⋅Menotti-Raymond, Marilyn⋅Menotti-Raymond, M.⋅O'Brien, Stephen⋅O'Brien, Stephen J⋅O’Brien, S.J.⋅Wilson, Richard⋅Wilson, R.K.⋅Wilson, Richard K⋅Lyons, Leslie⋅Lyons, L.A.⋅Lyons, Leslie A⋅Murphy, William⋅Murphy, W.J.⋅Murphy, William J⋅Warren, Wesley C⋅Warren, W.C. and Warren, Wesley
Proceedings of the National Academy of Sciences of the United States of America, vol. 111, (no. 48), pp. 17230-17235, December 2, 2014. | Journal Article
 
Extensive Error in the Number of Genes Inferred from Draft Genome Assemblies
Denton, James⋅Lugo-Martinez, Jose⋅Tucker, Abraham⋅Schrider, Daniel⋅Warren, Wesley and Hahn, Matthew
PLoS Computational Biology, vol. 10, (no. 12), pp. e1003998, Dec 2014. | Journal Article
 
Gene expression divergence between malaria vector sibling species Anopheles gambiae and An. coluzzii from rural and urban Yaoundé Cameroon
Cassone, Bryan J⋅Kamdem, Colince⋅Cheng, Changde⋅Tan, John C⋅Hahn, Matthew⋅Costantini, Carlo and Besansky, Nora J
Molecular Ecology, vol. 23, (no. 9), pp. 2242-2259, May 2014. | Journal Article
 
Gibbon genome and the fast karyotype evolution of small apes.
Carbone, Lucia⋅Carbone, Lucia⋅Harris, R A⋅Harris, R Alan⋅Gnerre, Sante⋅Gnerre, Sante⋅Veeramah, Krishna R⋅Veeramah, Krishna R⋅Lorente-Galdos, Belen⋅Lorente-Galdos, Belen⋅Huddleston, John⋅Huddleston, John⋅Meyer, Thomas J⋅Meyer, Thomas J⋅Herrero, Javier⋅Herrero, Javier⋅Roos, Christian⋅Roos, Christian⋅Aken, Bronwen⋅Aken, Bronwen⋅Anaclerio, Fabio⋅Anaclerio, Fabio⋅Archidiacono, Nicoletta⋅Archidiacono, Nicoletta⋅Baker, Carl⋅Baker, Carl⋅Barrell, Daniel⋅Barrell, Daniel⋅Batzer, Mark A⋅Batzer, Mark A⋅Beal, Kathryn⋅Beal, Kathryn⋅Blancher, Antoine⋅Blancher, Antoine⋅Bohrson, Craig L⋅Bohrson, Craig L⋅Brameier, Markus⋅Brameier, Markus⋅Campbell, Michael S⋅Campbell, Michael S⋅Capozzi, Oronzo⋅Capozzi, Oronzo⋅Casola, Claudio⋅Casola, Claudio⋅Chiatante, Giorgia⋅Chiatante, Giorgia⋅Cree, Andrew⋅Cree, Andrew⋅Damert, Annette⋅Damert, Annette⋅de Jong, Pieter J⋅de Jong, Pieter J⋅Dumas, Laura⋅Dumas, Laura⋅Fernandez-Callejo, Marcos⋅Fernandez-Callejo, Marcos⋅Flicek, Paul⋅Flicek, Paul⋅Fuchs, Nina V⋅Fuchs, Nina V⋅Gut, Ivo⋅Gut, Ivo⋅Gut, Marta⋅Gut, Marta⋅Hahn, Matthew W⋅Hahn, Matthew⋅Hernandez-Rodriguez, Jessica⋅Hernandez-Rodriguez, Jessica⋅Hillier, LaDeana W⋅Hillier, La Deana⋅Hubley, Robert⋅Hubley, Robert⋅Ianc, Bianca⋅Ianc, Bianca⋅Izsvák, Zsuzsanna⋅Izsvák, Zsuzsanna⋅Jablonski, Nina G⋅Jablonski, Nina G⋅Johnstone, Laurel M⋅Johnstone, Laurel M⋅Karimpour-Fard, Anis⋅Karimpour-Fard, Anis⋅Konkel, Miriam K⋅Konkel, Miriam K⋅Kostka, Dennis⋅Kostka, Dennis⋅Lazar, Nathan H⋅Lazar, Nathan H⋅Lee, Sandra L⋅Lee, Sandra L⋅Lewis, Lora R⋅Lewis, Lora R⋅Liu, Yue⋅Liu, Yue⋅Locke, Devin P⋅Locke, Devin P⋅Mallick, Swapan⋅Mallick, Swapan⋅Mendez, Fernando L⋅Mendez, Fernando L⋅Muffato, Matthieu⋅Muffato, Matthieu⋅Nazareth, Lynne V⋅Nazareth, Lynne V⋅Nevonen, Kimberly A⋅Nevonen, Kimberly A⋅O'Bleness, Majesta⋅O'Bleness, Majesta⋅Ochis, Cornelia⋅Ochis, Cornelia⋅Odom, Duncan T⋅Odom, Duncan T⋅Pollard, Katie⋅Pollard, Katherine S⋅Quilez, Javier⋅Quilez, Javier⋅Reich, David⋅Reich, David⋅Rocchi, Mariano⋅Rocchi, Mariano⋅Schumann, Gerald G⋅Schumann, Gerald G⋅Searle, Stephen⋅Searle, Stephen⋅Sikela, James M⋅Sikela, James M⋅Skollar, Gabriella⋅Skollar, Gabriella⋅Smit, Arian⋅Smit, Arian⋅Sonmez, Kemal⋅Sonmez, Kemal⋅ten Hallers, Boudewijn⋅ten Hallers, Boudewijn⋅Terhune, Elizabeth⋅Terhune, Elizabeth⋅Thomas, Gregg W⋅Thomas, Gregg W C⋅Ullmer, Brygg⋅Ullmer, Brygg⋅Ventura, Mario⋅Ventura, Mario⋅Walker, Jerilyn A⋅Walker, Jerilyn A⋅Wall, Jeffrey D⋅Wall, Jeffrey D⋅Walter, Lutz⋅Walter, Lutz⋅Ward, Michelle C⋅Ward, Michelle C⋅Wheelan, Sarah J⋅Wheelan, Sarah⋅Whelan, Christopher W⋅Whelan, Christopher W⋅White, Simon⋅White, Simon⋅Wilhelm, Larry J⋅Wilhelm, Larry J⋅Woerner, August E⋅Woerner, August E⋅Yandell, Mark⋅Yandell, Mark⋅Zhu, Baoli⋅Zhu, Baoli⋅Hammer, Michael F⋅Hammer, Michael F⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Eichler, Evan⋅Eichler, Evan E⋅Fulton, Lucinda⋅Fulton, Lucinda⋅Fronick, Catrina⋅Fronick, Catrina⋅Muzny, Donna M⋅Muzny, Donna M⋅Warren, Wesley C⋅Warren, Wesley C⋅Worley, Kim C⋅Worley, Kim C⋅Rogers, Jeffrey⋅Rogers, Jeffrey⋅Wilson, Richard K⋅Wilson, Richard K⋅Gibbs, Richard A and Gibbs, Richard A
Nature, vol. 513, (no. 7517), pp. 195-201, 2014/Sep/11. | Journal Article
 
Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
Cruickshank, Tami E and Hahn, Matthew
Molecular Ecology, vol. 23, (no. 13), pp. 3133-3157, Jul 2014. | Journal Article
 
Sequencing, assembling, and correcting draft genomes using recombinant populations.
Hahn, Matthew⋅Zhang, Simo V and Moyle, Leonie C
G3 (Bethesda, Md.), vol. 4, (no. 4), pp. 669-79, 2014. | Journal Article
 
Sex determination: why so many ways of doing it?
Bachtrog, D.⋅Bachtrog, Doris⋅Mank, J.E.⋅Mank, Judith E⋅Peichel, Catherine L⋅Peichel, C.L.⋅Kirkpatrick, Mark⋅Kirkpatrick, M.⋅Otto, S.P.⋅Otto, Sarah P⋅Ashman, T.-L.⋅Ashman, Tia Lynn⋅Hahn, Matthew W⋅Hahn, M.W.⋅Kitano, Jun⋅Kitano, J.⋅Mayrose, Itay⋅Mayrose, I.⋅Ming, R.⋅Ming, Ray⋅Perrin, Nicolas⋅Perrin, N.⋅Ross, L.⋅Ross, Laura⋅Valenzuela, Nicole⋅Valenzuela, N.⋅Vamosi, Jana C⋅Vamosi, J.C.⋅Mank, J.E.⋅Consortium, Tree⋅Peichel, C.L.⋅Ashman, T.-L.⋅Blackmon, H.⋅Goldberg, E.E.⋅Hahn, M.W.⋅Kirkpatrick, M.⋅Kitano, J.⋅Mayrose, I.⋅Ming, R.⋅Pennell, M.W.⋅Perrin, N.⋅Valenzuela, N. and Vamosi, J.C.
PLoS biology, vol. 12, (no. 7), pp. e1001899, July 2014. | Journal Article
 
The common marmoset genome provides insight into primate biology and evolution
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Marvin⋅de Jong, Pieter J⋅de Jong, Pieter J⋅Jong, Pieter⋅Jong, Pieter⋅Rosario, Ricardo⋅Rosario, Ricardo⋅del Rosario, Ricardo C⋅del Rosario, Ricardo C⋅Delehaunty, Kkim⋅Delehaunty, Kkim⋅Delehaunty, Kkim D⋅Delehaunty, Kkim D⋅Dinh, Huyen⋅Dinh, Huyen⋅Dinh, Huyen H⋅Dinh, Huyen H⋅Eichler, Evan⋅Eichler, Evan E⋅Eichler, Evan⋅Eichler, Evan E⋅Fitzgerald, Stephen⋅Fitzgerald, Stephen⋅Fitzgerald, Stephen⋅Fitzgerald, Stephen⋅Flicek, Paul⋅Flicek, Paul⋅Flicek, Paul⋅Flicek, Paul⋅Fontenot, Catherine⋅Fontenot, Catherine C⋅Fontenot, Catherine⋅Fontenot, Catherine C⋅Fowler, R G⋅Fowler, R G⋅Fowler, R⋅Fowler, R⋅Fronick, Catrina⋅Fronick, Catrina⋅Fronick, Catrina⋅Fronick, Catrina⋅Fulton, Lucinda⋅Fulton, Lucinda A⋅Fulton, Lucinda A⋅Fulton, Lucinda⋅Fulton, Robert S⋅Fulton, Robert⋅Fulton, Robert S⋅Fulton, Robert⋅Gabisi, Ramatu⋅Gabisi, Ramatu A⋅Gabisi, Ramatu⋅Gabisi, Ramatu A⋅Gerlach, Daniel⋅Gerlach, Daniel⋅Gerlach, Daniel⋅Gerlach, Daniel⋅Graves, Tina⋅Graves, Tina A⋅Graves, Tina A⋅Graves, Tina⋅Gunaratne, 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L⋅Kovar, Christie⋅Kovar, Christie L⋅Kriventseva, Evgenia V⋅Kriventseva, Evgenia⋅Kriventseva, Evgenia V⋅Kriventseva, Evgenia⋅Lee, Sandra L⋅Lee, Sandra⋅Lee, Sandra L⋅Lee, Sandra⋅Lewis, Lora R⋅Lewis, Lora⋅Lewis, Lora R⋅Lewis, Lora⋅Liu, Yih-shin⋅Liu, Yih-shin⋅Liu, Yih-shin⋅Liu, Yih-shin⋅Lopez, John⋅Lopez, John⋅Lopez, John⋅Lopez, John⋅Lopez-Otin, Carlos⋅Lopez-Otin, Carlos⋅Lopez-Otin, Carlos⋅Lopez-Otin, Carlos⋅Lorente-Galdos, Belen⋅Lorente-Galdos, Belen⋅Lorente-Galdos, Belen⋅Lorente-Galdos, Belen⋅Mansfield, Keith⋅Mansfield, Keith G⋅Mansfield, Keith⋅Mansfield, Keith G⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Marques-Bonet, Tomas⋅Minx, Patrick⋅Minx, Patrick⋅Minx, Patrick⋅Minx, Patrick⋅Misceo, Doriana⋅Misceo, Doriana⋅Misceo, Doriana⋅Misceo, Doriana⋅Moncrieff, J⋅Moncrieff, J⋅Moncrieff, J S⋅Moncrieff, J S⋅Morgan, Margaret⋅Morgan, Margaret B⋅Morgan, Margaret⋅Morgan, Margaret B⋅Nazareth, Lynne⋅Nazareth, Lynne V⋅Nazareth, Lynne V⋅Nazareth, Lynne⋅Newsham, Irene⋅Newsham, 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San J⋅Ruiz, San J⋅Ruiz, San⋅Sajjadian, Saba⋅Sajjadian, Saba⋅Sajjadian, Saba⋅Sajjadian, Saba⋅Santibanez, Jireh⋅Santibanez, Jireh⋅Santibanez, Jireh⋅Santibanez, Jireh⋅Schrider, Daniel R⋅Schrider, Daniel R⋅Schrider, Daniel⋅Schrider, Daniel⋅Searle, Steve⋅Searle, Steve⋅Searle, Steve⋅Searle, Steve⋅Skaletsky, Helen⋅Skaletsky, Helen⋅Skaletsky, Helen⋅Skaletsky, Helen⋅Soibam, Benjamin⋅Soibam, Benjamin⋅Smit, Arian F⋅Smit, Arian F⋅Tennakoon, Jayantha B⋅Tennakoon, Jayantha B⋅Tomaska, Lubomir⋅Tomaska, Lubomir⋅Ullmer, Brygg⋅Ullmer, Brygg⋅Vejnar, Charles E⋅Vejnar, Charles E⋅Ventura, Mario⋅Ventura, Mario⋅Vilella, Albert J⋅Vilella, Albert J⋅Vinar, Tomas⋅Vinar, Tomas⋅Vogel, Jan-Hinnerk⋅Vogel, Jan-Hinnerk⋅Walker, Jerilyn A and Walker, Jerilyn A
Nature genetics, vol. 46, (no. 8), pp. 857, 2014-Aug. | Journal Article
 
The Human Mutation Rate Is Increasing, Even As It Slows
Thomas, Gregg W and Hahn, Matthew
Molecular Biology and Evolution, vol. 31, (no. 2), Feb 2014. | Journal Article