167 Publications (Page 1 of 7)
2022
Phylogenomic approaches to detecting and characterizing introgression
Hibbins, Mark S and Hahn, Matthew W
Feb 2022
2020
Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies
Waterhouse, Robert M⋅Aganezov, Sergey⋅Anselmetti, Yoann⋅Lee, Jiyoung⋅Ruzzante, Livio⋅Reijnders, Maarten J M F⋅Feron, Romain⋅Bérard, Sèverine⋅George, Phillip⋅Hahn, Matthew W⋅Howell, Paul I⋅Kamali, Maryam⋅Koren, Sergey⋅Lawson, Daniel⋅Maslen, Gareth⋅Peery, Ashley⋅Phillippy, Adam M⋅Sharakhova, Maria V⋅Tannier, Eric⋅Unger, Maria F⋅Zhang, Simo V⋅Alekseyev, Max A⋅Besansky, Nora J⋅Chauve, Cedric⋅Emrich, Scott J and Sharakhov, Igor V
BMC biology, vol. 18, (no. 1), pp. 1, 2020-01-02. | Journal Article
 
Gene content evolution in the arthropods
Thomas, G.W.C.⋅Thomas, G.W.C.⋅Thomas, Gregg W C⋅Thomas, G.W.C.⋅Thomas, Gregg W C⋅Thomas, G.W.C.⋅GWC, Thomas⋅Dohmen, E.⋅Dohmen, E.⋅Dohmen, Elias⋅E, Dohmen⋅Dohmen, E.⋅Dohmen, Elias⋅Dohmen, E.⋅Hughes, Daniel S T⋅DST, Hughes⋅Hughes, Daniel S T⋅Hughes, D.S.T.⋅Hughes, D.S.T.⋅Hughes, D.S.T.⋅Hughes, D.S.T.⋅Murali, S.C.⋅Murali, S.C.⋅Murali, Shwetha C⋅SC, Murali⋅Murali, S.C.⋅Murali, Shwetha C⋅Murali, S.C.⋅Poelchau, M.⋅Poelchau, M.⋅Poelchau, M.⋅M, Poelchau⋅Poelchau, Monica⋅Poelchau, Monica⋅Poelchau, M.⋅Glastad, K.⋅Glastad, K.⋅Glastad, K.⋅Glastad, Karl⋅K, Glastad⋅Glastad, Karl⋅Glastad, K.⋅Anstead, C.A.⋅Anstead, Clare A⋅CA, Anstead⋅Anstead, Clare A⋅Anstead, C.A.⋅Anstead, C.A.⋅Anstead, C.A.⋅Ayoub, N.A.⋅NA, Ayoub⋅Ayoub, N.A.⋅Ayoub, N.A.⋅Ayoub, Nadia A⋅Ayoub, Nadia A⋅Ayoub, N.A.⋅P, Batterham⋅Batterham, Phillip⋅Batterham, P.⋅Batterham, P.⋅Batterham, Phillip⋅Batterham, P.⋅Batterham, P.⋅Bellair, Michelle⋅Bellair, M.⋅Bellair, M.⋅Bellair, M.⋅M, Bellair⋅Bellair, M.⋅Bellair, Michelle⋅Binford, Greta J⋅Binford, Greta J⋅Binford, G.J.⋅Binford, G.J.⋅GJ, Binford⋅Binford, G.J.⋅Binford, G.J.⋅Chao, H.⋅Chao, H.⋅Chao, H.⋅Chao, Hsu⋅Chao, H.⋅H, Chao⋅Chao, Hsu⋅Chen, Y.H.⋅Chen, Y.H.⋅YH, Chen⋅Chen, Y.H.⋅Chen, Yolanda H⋅Chen, Yolanda H⋅Chen, Y.H.⋅Childers, C.⋅Childers, C.⋅Childers, C.⋅Childers, Christopher⋅S, Richards⋅Childers, Christopher⋅Childers, C.⋅Dinh, Huyen⋅Dinh, H.⋅Dinh, H.⋅Dinh, Huyen⋅Dinh, H.⋅Dinh, H.⋅Doddapaneni, Harsha Vardhan⋅Doddapaneni, H.V.⋅Doddapaneni, H.V.⋅Doddapaneni, H.V.⋅Doddapaneni, Harsha Vardhan⋅Doddapaneni, H.V.⋅Duan, J.J.⋅Duan, J.J.⋅Duan, Jian J⋅Duan, Jian J⋅Duan, J.J.⋅Duan, J.J.⋅Dugan, S.⋅Dugan, Shannon⋅Dugan, S.⋅Dugan, S.⋅Dugan, Shannon⋅Dugan, S.⋅Esposito, L.A.⋅Esposito, L.A.⋅Esposito, L.A.⋅Esposito, L.A.⋅Esposito, Lauren A⋅Esposito, Lauren A⋅Friedrich, Markus⋅Friedrich, M.⋅Friedrich, Markus⋅Friedrich, M.⋅Friedrich, M.⋅Friedrich, M.⋅Garb, Jessica⋅Garb, J.⋅Garb, Jessica⋅Garb, J.⋅Garb, J.⋅Garb, J.⋅Gasser, Robin B⋅Gasser, R.B.⋅Gasser, R.B.⋅Gasser, R.B.⋅Gasser, Robin B⋅Gasser, R.B.⋅Goodisman, M.A.D.⋅Goodisman, Michael A D⋅Goodisman, M.A.D.⋅Goodisman, M.A.D.⋅Goodisman, Michael A D⋅Goodisman, M.A.D.⋅Gundersen-Rindal, D.E.⋅Gundersen-Rindal, D.E.⋅Gundersen-Rindal, Dawn E⋅Gundersen-Rindal, D.E.⋅Gundersen-Rindal, D.E.⋅Gundersen-Rindal, Dawn E⋅Han, Y.⋅Han, Yi⋅Han, Y.⋅Han, Y.⋅Han, Yi⋅Han, Y.⋅Handler, Alfred M⋅Handler, Alfred M⋅Handler, A.M.⋅Handler, A.M.⋅Handler, A.M.⋅Handler, A.M.⋅Hatakeyama, M.⋅Hatakeyama, M.⋅Hatakeyama, M.⋅Hatakeyama, Masatsugu⋅Hatakeyama, Masatsugu⋅Hatakeyama, M.⋅Hering, L.⋅Hering, Lars⋅Hering, L.⋅Hering, Lars⋅Hering, L.⋅Hering, L.⋅Hunter, Wayne B⋅Hunter, W.B.⋅Hunter, Wayne B⋅Hunter, W.B.⋅Hunter, W.B.⋅Hunter, W.B.⋅Ioannidis, P.⋅Ioannidis, Panagiotis⋅Ioannidis, Panagiotis⋅Ioannidis, P.⋅Ioannidis, P.⋅Ioannidis, P.⋅Jayaseelan, J.C.⋅Jayaseelan, J.C.⋅Jayaseelan, Joy C⋅Jayaseelan, J.C.⋅Jayaseelan, Joy C⋅Jayaseelan, J.C.⋅Kalra, Divya⋅Kalra, D.⋅Kalra, D.⋅Kalra, D.⋅Kalra, D.⋅Kalra, Divya⋅Khila, Abderrahman⋅Khila, A.⋅Khila, A.⋅Khila, A.⋅Khila, A.⋅Khila, Abderrahman⋅Korhonen, Pasi K⋅Korhonen, Pasi K⋅Korhonen, P.K.⋅Korhonen, P.K.⋅Korhonen, P.K.⋅Korhonen, P.K.⋅Lee, C.E.⋅Lee, Carol Eunmi⋅Lee, Carol Eunmi⋅Lee, C.E.⋅Lee, C.E.⋅Lee, C.E.⋅Lee, Sandra L⋅Lee, S.L.⋅Lee, S.L.⋅Lee, Sandra L⋅Lee, S.L.⋅Lee, S.L.⋅Li, Yiyuan⋅Li, Y.⋅Li, Yiyuan⋅Li, Y.⋅Li, Y.⋅Li, Y.⋅Lindsey, Amelia R I⋅Lindsey, A.R.I.⋅Lindsey, A.R.I.⋅Lindsey, A.R.I.⋅Lindsey, Amelia R I⋅Lindsey, A.R.I.⋅Mayer, G.⋅Mayer, G.⋅Mayer, Georg⋅Mayer, G.⋅Mayer, Georg⋅Mayer, G.⋅McGregor, Alistair P⋅McGregor, Alistair P⋅McGregor, A.P.⋅McGregor, A.P.⋅McGregor, A.P.⋅McGregor, A.P.⋅McKenna, Duane D⋅McKenna, D.D.⋅McKenna, D.D.⋅McKenna, D.D.⋅McKenna, D.D.⋅McKenna, Duane D⋅Misof, B.⋅Misof, Bernhard⋅Misof, Bernhard⋅Misof, B.⋅Misof, B.⋅Misof, B.⋅Munidasa, M.⋅Munidasa, Mala⋅Munidasa, M.⋅Munidasa, M.⋅Munidasa, Mala⋅Munidasa, M.⋅Munoz-Torres, M.⋅Munoz-Torres, M.⋅Munoz-Torres, Monica⋅Munoz-Torres, M.⋅Munoz-Torres, M.⋅Munoz-Torres, Monica⋅Muzny, Donna M⋅Muzny, D.M.⋅Muzny, D.M.⋅Muzny, Donna M⋅Muzny, D.M.⋅Muzny, D.M.⋅Niehuis, O.⋅Niehuis, O.⋅Niehuis, O.⋅Niehuis, Oliver⋅Niehuis, O.⋅Niehuis, Oliver⋅Osuji-Lacy, Nkechinyere⋅Osuji-Lacy, N.⋅Osuji-Lacy, N.⋅Osuji-Lacy, N.⋅Osuji-Lacy, Nkechinyere⋅Osuji-Lacy, N.⋅Palli, S.R.⋅Palli, S.R.⋅Palli, Subba R⋅Palli, Subba R⋅Palli, S.R.⋅Palli, S.R.⋅Panfilio, K.A.⋅Panfilio, Kristen A⋅Panfilio, K.A.⋅Panfilio, K.A.⋅Panfilio, K.A.⋅Panfilio, Kristen A⋅Pechmann, Matthias⋅Pechmann, M.⋅Pechmann, M.⋅Pechmann, Matthias⋅Pechmann, M.⋅Pechmann, M.⋅Perry, Trent⋅Perry, T.⋅Perry, T.⋅Perry, T.⋅Perry, T.⋅Perry, Trent⋅Peters, R.S.⋅Peters, R.S.⋅Peters, R.S.⋅Peters, Ralph S⋅Peters, R.S.⋅Peters, Ralph S⋅Poynton, H.C.⋅Poynton, H.C.⋅Poynton, H.C.⋅Poynton, Helen C⋅Poynton, Helen C⋅Poynton, H.C.⋅Prpic, N.-M.⋅Prpic, N.-M.⋅Prpic, N.-M.⋅Prpic, Nikola-Michael⋅Prpic, N.-M.⋅Prpic, Nikola-Michael⋅Qu, J.⋅Qu, Jiaxin⋅Qu, J.⋅Qu, J.⋅Qu, J.⋅Qu, Jiaxin⋅Rotenberg, D.⋅Rotenberg, Dorith⋅Rotenberg, D.⋅Rotenberg, D.⋅Rotenberg, D.⋅Rotenberg, Dorith⋅Schal, Coby⋅Schal, C.⋅Schal, C.⋅Schal, C.⋅Schal, C.⋅Schal, Coby⋅Schoville, Sean D⋅Schoville, S.D.⋅Schoville, S.D.⋅Schoville, S.D.⋅Schoville, S.D.⋅Schoville, Sean D⋅Scully, E.D.⋅Scully, E.D.⋅Scully, Erin D⋅Scully, E.D.⋅Scully, Erin D⋅Scully, E.D.⋅Skinner, E.⋅Skinner, Evette⋅Skinner, Evette⋅Skinner, E.⋅Skinner, E.⋅Skinner, E.⋅Sloan, Daniel B⋅Sloan, D.B.⋅Sloan, D.B.⋅Sloan, Daniel B⋅Sloan, D.B.⋅Sloan, D.B.⋅Stouthamer, Richard⋅Stouthamer, R.⋅Stouthamer, R.⋅Stouthamer, Richard⋅Stouthamer, R.⋅Stouthamer, R.⋅Strand, Michael R⋅Strand, M.R.⋅Strand, M.R.⋅Strand, M.R.⋅Strand, M.R.⋅Strand, Michael R⋅Szucsich, N.U.⋅Szucsich, Nikolaus U⋅Szucsich, Nikolaus U⋅Szucsich, N.U.⋅Szucsich, N.U.⋅Szucsich, N.U.⋅Wijeratne, Asela⋅Wijeratne, A.⋅Wijeratne, A.⋅Wijeratne, A.⋅Wijeratne, A.⋅Wijeratne, Asela⋅Young, Neil D⋅Young, Neil D⋅Young, N.D.⋅Young, N.D.⋅Young, N.D.⋅Young, N.D.⋅Zattara, E.E.⋅Zattara, Eduardo E⋅Zattara, E.E.⋅Zattara, Eduardo E⋅Zattara, E.E.⋅Zattara, E.E.⋅Benoit, Joshua B⋅Benoit, Joshua B⋅Benoit, J.B.⋅Benoit, J.B.⋅Benoit, J.B.⋅Benoit, J.B.⋅Zdobnov, Evgeny M⋅Zdobnov, Evgeny M⋅Zdobnov, E.M.⋅Zdobnov, E.M.⋅Zdobnov, E.M.⋅Zdobnov, E.M.⋅Pfrender, M.E.⋅Pfrender, Michael E⋅Pfrender, M.E.⋅Pfrender, M.E.⋅Pfrender, Michael E⋅Pfrender, M.E.⋅Hackett, Kevin J⋅Hackett, K.J.⋅Hackett, K.J.⋅Hackett, Kevin J⋅Hackett, K.J.⋅Hackett, K.J.⋅Werren, John H⋅Werren, J.H.⋅Werren, J.H.⋅Werren, J.H.⋅Werren, J.H.⋅Werren, John H⋅Worley, K.C.⋅Worley, K.C.⋅Worley, Kim C⋅Worley, Kim C⋅Worley, K.C.⋅Worley, K.C.⋅Gibbs, Richard A⋅Gibbs, R.A.⋅Gibbs, Richard A⋅Gibbs, R.A.⋅Gibbs, R.A.⋅Gibbs, R.A.⋅Chipman, Ariel D⋅Chipman, A.D.⋅Chipman, A.D.⋅Chipman, Ariel D⋅Chipman, A.D.⋅Chipman, A.D.⋅Waterhouse, R.M.⋅Waterhouse, R.M.⋅Waterhouse, Robert M⋅Waterhouse, R.M.⋅Waterhouse, Robert M⋅Waterhouse, R.M.⋅Bornberg-Bauer, E.⋅Bornberg-Bauer, E.⋅Bornberg-Bauer, E.⋅Bornberg-Bauer, Erich⋅Bornberg-Bauer, E.⋅Bornberg-Bauer, Erich⋅Hahn, Matthew W⋅Hahn, M.W.⋅Hahn, M.W.⋅Hahn, M.W.⋅Hahn, Matthew W⋅Hahn, M.W.⋅Richards, Stephen⋅Richards, S.⋅Richards, S.⋅Richards, S.⋅Richards, S. and Richards, Stephen
Genome biology, vol. 21, (no. 1), pp. 15, 2020-01-23. | Journal Article
 
New methods to calculate concordance factors for phylogenomic datasets
Minh, Bui Quang⋅Hahn, Matthew W and Lanfear, Robert
Molecular biology and evolution, 2020-May-04. | Journal Article
 
Paternal age in rhesus macaques is positively associated with germline mutation accumulation but not with measures of offspring sociability
Wang, Richard J⋅Wang, Richard J⋅Thomas, Gregg W⋅Thomas, Gregg W C⋅Raveendran, Muthuswamy⋅Raveendran, Muthuswamy⋅Harris, R Alan⋅Harris, R A⋅Doddapaneni, Harshavardhan⋅Doddapaneni, Harshavardhan⋅Muzny, Donna M⋅Muzny, Donna M⋅Capitanio, John P⋅Capitanio, John P⋅Radivojac, Predrag⋅Radivojac, Predrag⋅Rogers, Jeffrey⋅Rogers, Jeffrey⋅Hahn, Matthew W and Hahn, Matthew W
Genome Research, vol. 30, (no. 6), Jun 2020. | Journal Article
 
Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression
Vanderpool, Dan⋅Bui, Quang M⋅Lanfear, Robert⋅Hughes, Daniel⋅Harris, R A⋅Raveendran, Muthuswamy⋅Muzny, Donna M⋅Hibbins, Mark S⋅Williamson, Robert J⋅Gibbs, Richard A⋅Worley, Kim C⋅Rogers, Jeffrey and Hahn, Matthew W
PLoS Biology, vol. 18, (no. 12), Dec 2020. | Journal Article
2019
A new class of metrics for learning on real-valued and structured data
Yang, Ruiyu⋅Yang, Ruiyu⋅Yang, Ruiyu⋅Jiang, Yuxiang⋅Jiang, Yuxiang⋅Jiang, Yuxiang⋅Mathews, Scott⋅Mathews, Scott⋅Mathews, Scott⋅Housworth, Elizabeth⋅Housworth, Elizabeth A⋅Housworth, Elizabeth⋅Hahn, Matthew⋅Hahn, Matthew⋅Hahn, Matthew W⋅Radivojac, Predrag⋅Radivojac, Predrag and Radivojac, Predrag
Data Mining and Knowledge Discovery, vol. 33, (no. 4), pp. 1016, 20190701. | Journal Article
 
Association mapping desiccation resistance within chromosomal inversions in the African malaria vector Anopheles gambiae
Ayala, Diego⋅Zhang, Simo⋅Chateau, Mathieu⋅Fouet, Caroline⋅Morlais, Isabelle⋅Costantini, Carlo⋅Hahn, Matthew W and Besansky, Nora J
Molecular Ecology, vol. 28, (no. 6), pp. 1342, March 2019. | Journal Article
 
A Three-Sample Test for Introgression
Hahn, Matthew W and Hibbins, Mark S
Molecular Biology and Evolution, vol. 36, (no. 12), pp. 2882, 20191201. | Journal Article
 
Genome variation and population structure among 1,142 mosquitoes of the African malaria vector species Anopheles gambiaeand Anopheles coluzzii
Clarkson, Chris⋅Miles, Alistair⋅Harding, Nicholas⋅Lucas, Eric⋅Battey, C⋅Amaya-Romero, Jorge⋅Cano, Jorge⋅Diabaté, Abdoulaye⋅Constant, Edi⋅Nwakanma, Davis⋅Jawara, Musa⋅Essandoh, John⋅Dinis, Joao⋅Le Goff, Gilbert⋅Robert, Vincent⋅Troco, Arlete⋅Costantini, Carlo⋅Rohatgi, Kyanne⋅Elissa, Nohal⋅Coulibaly, Boubacar⋅Midega, Janet⋅Mbogo, Charles⋅Mawejje, Henry⋅Stalker, Jim⋅Rockett, Kirk⋅ry, Eleanor⋅Mead, Daniel⋅Jeffreys, Anna⋅Hubbart, Christina⋅Rowlands, Kate⋅Isaacs, Alison⋅Jyothi, Dushyanth⋅Malangone, Cinzia⋅Kamali, Maryam⋅Henrichs, Christa⋅Simpson, Victoria⋅Ayala, Diego⋅Besansky, Nora⋅Burt, Austin⋅Caputo, Beniamino⋅Torre, Alessana⋅Fontaine, Michael⋅Godfray, H⋅Hahn, Matthew⋅Kern, Anew⋅Lawniczak, Mara⋅O'Loughlin, Samantha⋅Pinto, João⋅Riehle, Michelle⋅Sharakhov, Igor⋅Schrider, Daniel⋅Vernick, Kenneth⋅White, Bradley⋅Donnelly, Martin and Kwiatkowski, Dominic
bioRxiv, 2019-12-01. | Journal Article
 
Patterns of transposable element variation and clinality in Drosophila
Adrion, Jeffrey R⋅Adrion, Jeffrey R⋅Begun, David J⋅Begun, David J⋅Hahn, Matthew W and Hahn, Matthew W
Molecular Ecology, vol. 28, (no. 6), pp. 1536, March 2019. | Journal Article
 
Referee: Reference Assembly Quality Scores
Thomas, Gregg W C and Hahn, Matthew W
Genome biology and evolution, vol. 11, (no. 5), pp. 1486, 2019-May-01. | Journal Article
 
The comparative genomics and complex population history of Papio baboons
Rogers, Jeffrey⋅Rogers, Jeffrey⋅Rogers, Jeffrey⋅Raveendran, Muthuswamy⋅Raveendran, Muthuswamy⋅Raveendran, Muthuswamy⋅Harris, R.⋅Harris, R.⋅Harris, R Alan⋅Mailund, Thomas⋅Mailund, Thomas⋅Mailund, Thomas⋅Leppälä, Kalle⋅Leppälä, Kalle⋅Leppälä, Kalle⋅Athanasiadis, Georgios⋅Athanasiadis, Georgios⋅Athanasiadis, Georgios⋅Schierup, Mikkel Heide⋅Schierup, Mikkel⋅Schierup, Mikkel⋅Cheng, Jade⋅Cheng, Jade⋅Cheng, Jade⋅Munch, Kasper⋅Munch, Kasper⋅Munch, Kasper⋅Walker, Jerilyn⋅Walker, Jerilyn A⋅Walker, Jerilyn⋅Konkel, Miriam K⋅Konkel, Miriam⋅Konkel, Miriam⋅Jordan, Vallmer⋅Jordan, Vallmer⋅Jordan, Vallmer⋅Steely, Cody⋅Steely, Cody J⋅Steely, Cody⋅Beckstrom, Thomas O⋅Beckstrom, Thomas⋅Beckstrom, Thomas⋅Bergey, Christina⋅Bergey, Christina⋅Bergey, Christina⋅Burrell, Andrew⋅Burrell, Andrew⋅Burrell, Andrew⋅Schrempf, Dominik⋅Schrempf, Dominik⋅Schrempf, Dominik⋅Noll, Angela⋅Noll, Angela⋅Noll, Angela⋅Kothe, Maximillian⋅Kothe, Maximillian⋅Kothe, Maximillian⋅Kopp, Gisela H⋅Kopp, Gisela⋅Kopp, Gisela⋅Liu, Yue⋅Liu, Yue⋅Liu, Yue⋅Murali, Shwetha⋅Murali, Shwetha⋅Murali, Shwetha⋅Billis, Konstantinos⋅Billis, Konstantinos⋅Billis, Konstantinos⋅Martin, Fergal J⋅Martin, Fergal⋅Martin, Fergal⋅Muffato, Matthieu⋅Muffato, Matthieu⋅Muffato, Matthieu⋅Cox, Laura⋅Cox, Laura⋅Cox, Laura⋅Else, James⋅Else, James⋅Else, James⋅Disotell, Todd⋅Disotell, Todd⋅Disotell, Todd⋅Muzny, Donna⋅Muzny, Donna M⋅Muzny, Donna⋅Phillips-conroy, Jane⋅Phillips-conroy, Jane⋅Phillips-Conroy, Jane⋅Aken, Bronwen⋅Aken, Bronwen⋅Aken, Bronwen⋅Eichler, Evan⋅Eichler, Evan E⋅Eichler, Evan⋅Marques-bonet, Tomas⋅Marques-bonet, Tomas⋅Marques-Bonet, Tomas⋅Kosiol, Carolin⋅Kosiol, Carolin⋅Kosiol, Carolin⋅Batzer, Mark⋅Batzer, Mark⋅Batzer, Mark A⋅Hahn, Matthew W⋅Hahn, Matthew⋅Hahn, Matthew⋅Tung, Jenny⋅Tung, Jenny⋅Tung, Jenny⋅Zinner, Dietmar⋅Zinner, Dietmar⋅Zinner, Dietmar⋅Roos, Christian⋅Roos, Christian⋅Roos, Christian⋅Jolly, Clifford J⋅Jolly, Clifford⋅Jolly, Clifford⋅Gibbs, Richard⋅Gibbs, Richard A⋅Gibbs, Richard⋅Worley, Kim⋅Worley, Kim C and Worley, Kim
2019-01-30. | Journal Article
 
The perils of intralocus recombination for inferences of molecular convergence
Mendes, Fábio K⋅Livera, Andrew P and Hahn, Matthew W
Philosophical transactions of the Royal Society of London. Series B, Biological sciences, vol. 374, (no. 1777), pp. 20180244, 2019-Jul-22. | Journal Article
 
The Timing and Direction of Introgression Under the Multispecies Network Coalescent
Hibbins, Mark S and Hahn, Matthew W
Genetics, vol. 211, (no. 3), pp. 1073, 2019-Jan-22. | Journal Article
2018
A multispecies coalescent model for quantitative traits
Mendes, Fábio K⋅Fuentes-González, Jesualdo A⋅Schraiber, Joshua G and Hahn, Matthew W
eLife, vol. 7, 2018-08-14. | Journal Article
 
Clonal polymorphism and high heterozygosity in the celibate genome of the Amazon molly
Warren, Wesley C⋅García-Pérez, Raquel⋅Xu, Sen⋅Lampert, Kathrin P⋅Chalopin, Domitille⋅Stöck, Matthias⋅Loewe, Laurence⋅Lu, Yuan⋅Kuderna, Lukas⋅Minx, Patrick⋅Montague, Michael J⋅Tomlinson, Chad⋅Hillier, LaDeana W⋅Murphy, Daniel N⋅Wang, John⋅Wang, Zhongwei⋅Garcia, Constantino Macias⋅Thomas, Gregg C W⋅Volff, Jean-Nicolas⋅Farias, Fabiana⋅Aken, Bronwen⋅Walter, Ronald B⋅Pruitt, Kim D⋅Marques-Bonet, Tomas⋅Hahn, Matthew W⋅Kneitz, Susanne⋅Lynch, Michael and Schartl, Manfred
Nature ecology & evolution, vol. 2, (no. 4), pp. 679, 2018-04-00. | Journal Article
 
Dissecting the basis of novel trait evolution in a radiation with widespread phylogenetic discordance.
Wu, Meng⋅Wu, Meng⋅Kostyun, Jamie L⋅Kostyun, Jamie L⋅Hahn, Matthew W⋅Hahn, Matthew W⋅Moyle, Leonie C and Moyle, Leonie C
Molecular ecology, June 28, 2018. | Journal Article
 
Evaluating methods to visualize patterns of genetic differentiation on a landscape
House, Geoffrey L and Hahn, Matthew W
Molecular Ecology Resources, vol. 18, (no. 3), pp. 460, May 2018. | Journal Article
 
Multinucleotide mutations cause false inferences of lineage-specific positive selection
Venkat, Aarti⋅Venkat, Aarti⋅Hahn, Matthew W⋅Hahn, Matthew W⋅Hahn, Matthew W⋅Thornton, Joseph W⋅Thornton, Joseph W and Thornton, Joseph W
Nature ecology & evolution, vol. 2, (no. 8), pp. 1288, 2018-08-00. | Journal Article
 
Proteomic Evidence for In-Frame and Out-of-Frame Alternatively Spliced Isoforms in Human and Mouse
Ramalho, Rodrigo⋅Ramalho, Rodrigo⋅Li, Sujun⋅Li, Sujun⋅Radivojac, Predrag⋅Radivojac, Predrag⋅Hahn, Matthew and Hahn, Matthew
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), vol. 15, (no. 4), pp. 1289, 07-01-2018. | Journal Article
 
Quantifying the risk of hemiplasy in phylogenetic inference
Guerrero, Rafael F and Hahn, Matthew W
Proceedings of the National Academy of Sciences of the United States of America, vol. 115, (no. 50), pp. 12792, 2018-12-11. | Journal Article
 
Reproductive Longevity Predicts Mutation Rates in Primates
Thomas, Gregg W C⋅Thomas, Gregg W.C⋅Wang, Richard J⋅Wang, Richard J⋅Puri, Arthi⋅Puri, Arthi⋅Harris, R Alan⋅Harris, R. Alan⋅Raveendran, Muthuswamy⋅Raveendran, Muthuswamy⋅Hughes, Daniel S.T⋅Hughes, Daniel S T⋅Murali, Shwetha C⋅Murali, Shwetha C⋅Williams, Lawrence E⋅Williams, Lawrence E⋅Doddapaneni, Harsha⋅Doddapaneni, Harsha⋅Muzny, Donna M⋅Muzny, Donna M⋅Gibbs, Richard A⋅Gibbs, Richard A⋅Abee, Christian R⋅Abee, Christian R⋅Galinski, Mary R⋅Galinski, Mary R⋅Worley, Kim C⋅Worley, Kim C⋅Rogers, Jeffrey⋅Rogers, Jeffrey⋅Radivojac, Predrag⋅Radivojac, Predrag⋅Hahn, Matthew W and Hahn, Matthew W
Current Biology, vol. 28, (no. 19), pp. 3197.e5, 2018-10-08. | Journal Article
 
Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host
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Speciation genes are more likely to have discordant gene trees
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