99 Publications (Page 4 of 4)
2019
Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions.
Rosenfeld, Cheryl S⋅Hekman, Jessica P⋅Johnson, Jennifer L⋅Lyu, Zhen⋅Ortega, Madison T⋅Joshi, Trupti⋅Mao, Jiude⋅Vladimirova, Anastasiya V⋅Gulevich, Rimma G⋅Kharlamova, Anastasiya V⋅Acland, Gregory M⋅Hecht, Erin E⋅Wang, Xu⋅Clark, Andrew G⋅Trut, Lyudmila N⋅Behura, Susanta K and Kukekova, Anna V
Genes, brain, and behavior. | Journal Article
2018
Genome assembly of the A-group Wolbachia in Nasonia oneida and phylogenomic analysis of Wolbachia strains revealed genome evolution and lateral gene transfer
 
Genomic responses to selection for tame/aggressive behaviors in the silver fox (Vulpes vulpes). Proceedings of the National Academy of Sciences of the United States of America
. | Journal Article
 
Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours
Kukekova, Anna V.⋅Kukekova, Anna V⋅Johnson, Jennifer L⋅Johnson, Jennifer L.⋅Xiang, Xueyan⋅Feng, Shaohong⋅Liu, Shiping⋅Liu, Shiping⋅Rando, Halie M.⋅Rando, Halie M⋅Kharlamova, Anastasiya V⋅Kharlamova, Anastasiya V.⋅Herbeck, Yury⋅Serdyukova, Natalya A.⋅Serdyukova, Natalya A⋅⋅Xiong, Zijun⋅Beklemischeva, Violetta⋅Koepfli, Klaus-Peter⋅Klaus-Peter, Koepfli⋅Gulevich, Rimma G.⋅Gulevich, Rimma G⋅Vladimirova, Anastasiya V⋅Vladimirova, Anastasiya V.⋅Hekman, Jessica P.⋅Hekman, Jessica P⋅Perelman, Polina L.⋅Perelman, Polina L⋅Graphodatsky, Aleksander S⋅Graphodatsky, Aleksander S.⋅O’Brien, Stephen J.⋅Wang, Xu⋅Wang, Xu⋅Clark, Andrew G⋅Clark, Andrew G.⋅Acland, Gregory M⋅Acland, Gregory M.⋅Trut, Lyudmila N.⋅ and Zhang, Guojie
Nature Ecology & Evolution, vol. 2, pp. 1479–1491. | Journal Article
 
TIVAN: Tissue-specific cis-eQTL single nucleotide variant annotation and prediction
Chen, Li⋅Chen, Li⋅Chen, L.⋅Chen, Li⋅Wang, Ye⋅Wang, Ye⋅Wang, Ye⋅Wang, Y.⋅Yao, Bing⋅Yao, Bing⋅Yao, B.⋅Yao, Bing⋅Mitra, Amit⋅Mitra, Amit⋅Mitra, Amit⋅Mitra, A.⋅Wang, Xu⋅Wang, Xu⋅Wang, X.⋅Wang, Xu⋅Qin, Xiao⋅Qin, Xiao⋅Qin, X. and Qin, Xiao
Bioinformatics. | Journal Article
2017
Genomic imprinting does not reduce the dosage of UBE3A in neurons
Hillman, Paul R⋅Hillman, Paul R⋅Hillman, Paul R.⋅Christian, Sarah G⋅Christian, Sarah G⋅Christian, Sarah G. B.⋅Doan, Ryan⋅Doan, Ryan⋅Doan, Ryan⋅Cohen, Noah D.⋅Cohen, Noah D⋅Cohen, Noah D⋅Konganti, Kranti⋅Konganti, Kranti⋅Konganti, Kranti⋅Kory, Douglas⋅Douglas, Kory⋅Kory, Douglas⋅Wang, Xu⋅Wang, Xu⋅Wang, Xu⋅Samollow, Paul B⋅Samollow, Paul B.⋅Samollow, Paul B⋅Dindot, Scott V⋅Dindot, Scott V and Dindot, Scott V.
Epigenetics & Chromatin, vol. 10. | Journal Article
 
Genomic responses to selection for tame/aggressive behaviors in the silver fox (Vulpes vulpes)
Wang, Xu⋅Pipes, Lenore⋅Trut, Lyudmila N.⋅Herbeck, Yury⋅Vladimirova, Anastasiya V.⋅Gulevich, Rimma G.⋅Kharlamova, Anastasiya V.⋅Johnson, Jennifer L.⋅Acland, Gregory M.⋅Kukekova, Anna V. and Clark, Andrew G.
Cold Spring Harbor Laboratory
2016
Allele-Specific Transcriptome and Methylome Analysis Reveals Stable Inheritance and Cis-Regulation of DNA Methylation in Nasonia.
Wang, Xu⋅Werren, John H and Clark, Andrew G
PLoS biology, vol. 14, (no. 7), pp. e1002500, July 2016. | Journal Article
 
OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis
Rago, Alfredo⋅Gilbert, Donald G.⋅Choi, Jeong-Hyeon⋅Sackton, Timothy B.⋅Wang, Xu⋅Kelkar, Yogeshwar D.⋅Werren, John H. and Colbourne, John K.
Bmc Genomics, vol. 17. | Journal Article
2015
Genetic and epigenetic architecture of sex-biased expression in the jewel wasps Nasonia vitripennis and giraulti.
Wang, Xu⋅Werren, John H and Clark, Andrew G
Proceedings of the National Academy of Sciences of the United States of America, vol. 112, (no. 27), pp. E3545-E3554, July 7, 2015. | Journal Article
 
The genetic architecture of the genome-wide transcriptional response to ER stress in the mouse.
Chow, Clement Y⋅Chow, Clement Y⋅Wang, Xu⋅Wang, Xu⋅Riccardi, David⋅Riccardi, David⋅Wolfner, Mariana F⋅Wolfner, Mariana F⋅Clark, Andrew G and Clark, Andrew G
PLoS genetics, vol. 11, (no. 2), pp. e1004924, February 2015. | Journal Article
 
TRIM28 Controls Genomic Imprinting through Distinct Mechanisms during and after Early Genome-wide Reprogramming.
Alexander, Katherine A⋅Wang, Xu⋅Shibata, Maho⋅Clark, Andrew G⋅García-García, María J and Garcia-Garcia, Maria J.
Cell reports, vol. 13, (no. 6), pp. 1194-1205, November 10, 2015. | Journal Article
2014
Chromosome-wide profiling of X-chromosome inactivation and epigenetic states in fetal brain and placenta of the opossum, Monodelphis domestica.
Wang, Xu⋅Douglas, Kory C⋅Vandeberg, John L⋅VandeBerg, John L.⋅Clark, Andrew G and Samollow, Paul
Genome research, vol. 24, (no. 1), pp. 70-83, 2014/Jan. | Journal Article
 
Genome-wide histone state profiling of fibroblasts from the opossum, Monodelphis domestica, identifies the first marsupial-specific imprinted gene.
Douglas, Kory C⋅Wang, Xu⋅Jasti, Madhuri⋅Wolff, Abigail⋅Vandeberg, John L⋅VandeBerg, John L.⋅Clark, Andrew G and Samollow, Paul
BMC genomics, vol. 15, (no. 1), pp. 89, 2014. | Journal Article
 
Using next-generation RNA sequencing to identify imprinted genes
Wang, X and Clark, A
Heredity, vol. 113, (no. 2), pp. 156-66, Aug 2014. | Journal Article
2013
Function and evolution of DNA methylation in Nasonia vitripennis.
Wang, Xu⋅Wheeler, David A⋅Avery, Amanda⋅Rago, Alfredo⋅Choi, Jeong-Hyeon⋅Colbourne, John K⋅Clark, Andrew G and Werren, John H
PLoS genetics, vol. 9, (no. 10), pp. e1003872, 2013. | Journal Article
 
Paternally expressed genes predominate in the placenta
Wang, Xu⋅Miller, Donald C⋅Harman, Rebecca⋅Antczak, Doug and Clark, Andrew
Proceedings of the National Academy of Sciences of the United States of America, vol. 110, (no. 26), Jun 25, 2013. | Journal Article
2012
Random X inactivation in the mule and horse placenta.
Wang, Xu⋅Miller, Donald C⋅Clark, Andrew G and Antczak, Doug
Genome research, vol. 22, (no. 10), pp. 1855-63, 2012/Oct. | Journal Article
2011
A survey for novel imprinted genes in the mouse placenta by mRNA-seq.
Wang, Xu⋅Soloway, Paul D and Clark, Andrew G
Genetics, vol. 189, (no. 1), pp. 109-22, 2011/Sep. | Journal Article
2010
Contrasting methods of quantifying fine structure of human recombination.
Clark, Andrew G⋅Wang, Xu⋅Matise, Tara C⋅Chakravarti, A and Green, E
Annual review of genomics and human genetics, vol. 11, pp. 45-64, 2010. | Journal Article
 
Paternally biased X inactivation in mouse neonatal brain
Wang, Xu⋅Soloway, Paul and Clark, Andrew
Genome Biology, vol. 11, (no. 7), pp. R79-R79, 2010. | Journal Article
2008
A genome-wide approach to identifying novel-imprinted genes.
Pollard, Katherine S⋅Pollard, Katie⋅Serre, David⋅Serre, David⋅Wang, Xu⋅Wang, Xu⋅Tao, Heng⋅Tao, Heng⋅Grundberg, Elin⋅Grundberg, Elin⋅Hudson, Thomas J⋅Hudson, Tom⋅Clark, Andrew G⋅Clark, Andrew G⋅Frazer, Kelly and Frazer, Kelly
Human genetics, vol. 122, (no. 6), pp. 625-34, 2008/Jan. | Journal Article
 
Transcriptome-Wide Identification of Novel Imprinted Genes in Neonatal Mouse Brain
Wang, Xu⋅Sun, Qi⋅McGrath, Sean D⋅Mardis, Elaine R⋅Soloway, Paul⋅Clark, Andrew and Ferguson-Smith, Anne C
PloS ONE, vol. 3, (no. 12), pp. e3839, 2008. | Journal Article
2006
Two Dobzhansky-Muller Genes Interact to Cause Hybrid Lethality in Drosophila
Brideau, Nicholas J⋅Brideau, N.J.⋅Flores, H.A.⋅Flores, Heather A⋅Wang, Jun⋅Wang, J.⋅Maheshwari, S.⋅Maheshwari, Shamoni⋅Wang, Xu⋅Wang, X.⋅Barbash, D.A. and Barbash, Daniel
Science., vol. 314, (no. 5803), pp. 1292-1295, 2006. | Journal Article