155 Publications (Page 1 of 7)
2016
Finding the Patient's Voice Using Big Data: Analysis of Users' Health-Related Concerns in the ChaCha Question-and-Answer Service (2009-2012)Priest, Chad⋅Priest, Chad⋅Knopf, Amelia⋅Knopf, Amelia⋅Groves, Doyle⋅Groves, Doyle⋅Carpenter, Janet S⋅Carpenter, Janet S⋅Furrey, Christopher⋅Furrey, Christopher⋅Krishnan, Anand⋅Krishnan, Anand⋅Miller, Wendy R⋅Miller, Wendy R⋅Otte, Julie L⋅Otte, Julie L⋅Palakal, Mathew⋅Palakal, Mathew⋅Wiehe, Sarah⋅Wiehe, Sarah⋅Wilson, Jeffrey and Wilson, JeffreyJournal of medical Internet research, vol. 18, (no. 3), pp. e44, 2016-Mar-09.
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Finding the Patient’s Voice Using Big Data: Analysis of Users’ Health-Related Concerns in the ChaCha Question-and-Answer Service (2009–2012)Priest, Chad⋅Priest, Chad⋅Priest, Chad⋅Carpenter, Janet⋅Priest, Chad⋅Priest, Chad⋅Knopf, Amelia⋅Knopf, Amelia⋅Knopf, Amelia⋅Knopf, Amelia⋅Knopf, Amelia⋅Groves, Doyle⋅Groves, Doyle⋅Groves, Doyle⋅Groves, Doyle⋅Groves, Doyle⋅Carpenter, Janet S⋅Carpenter, Janet S⋅Carpenter, Janet S⋅Carpenter, Janet S⋅Carpenter, Janet S⋅Furrey, Christopher⋅Furrey, Christopher⋅Furrey, Christopher⋅Furrey, Christopher⋅Furrey, Christopher⋅Krishnan, Anand⋅Krishnan, Anand⋅Krishnan, Anand⋅Krishnan, Anand⋅Krishnan, Anand⋅Miller, Wendy R⋅Miller, Wendy R⋅Miller, Wendy R⋅Miller, Wendy R⋅Miller, Wendy R⋅Otte, Julie L⋅Otte, Julie L⋅Otte, Julie L⋅Otte, Julie L⋅Otte, Julie L⋅Palakal, Mathew⋅Palakal, Mathew⋅Palakal, Mathew⋅Palakal, Mathew⋅Palakal, Mathew⋅Wiehe, Sarah⋅Wiehe, Sarah⋅Wiehe, Sarah⋅Wiehe, Sarah⋅Wiehe, Sarah⋅Wilson, Jeffrey⋅Wilson, Jeffrey⋅Wilson, Jeffrey⋅Wilson, Jeffrey and Wilson, JeffreyJournal of Medical Internet Research, vol. 18, (no. 3), pp. e44, 2016-03-09.
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2015
A computational method for drug repositioning using publicly available gene expression dataShabana, K M⋅Abdul Nazeer, K A⋅Pradhan, Meeta and Palakal, MathewBMC bioinformatics, vol. 16 Suppl 17, (no. S17), pp. S5, 2015-00-00.
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A system biology approach for understanding the miRNA regulatory network in colon rectal cancerPradhan, Meeta⋅Nagulapalli, Kshithija⋅Ledford, Lakenvia⋅Pandit, Yogesh and Palakal, MathewInternational journal of data mining and bioinformatics, vol. 11, (no. 1), pp. 1, 2015-00-00.
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Automated pancreatic cyst screening using natural language processing: a new tool in the early detection of pancreatic cancerRoch, Alexandra⋅Roch, Alexandra M⋅Mehrabi, Saeed⋅Mehrabi, Saeed⋅Krishnan, Anand⋅Krishnan, Anand⋅Schmidt, Heidi⋅Schmidt, Heidi E⋅Kesterson, Joseph⋅Kesterson, Joseph⋅Beesley, Chris⋅Beesley, Chris⋅Dexter, Paul⋅Dexter, Paul R⋅Palakal, Mathew⋅Palakal, Mathew⋅Schmidt, C Max and Schmidt, C.HPB, vol. 17, (no. 5), pp. 453, 2015.
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Automatic Surface Scanning of 3D ArtifactsFang, Shiaofen⋅Fang, Shiaofen⋅George, Basil⋅George, Basil⋅Palakal, Mathew and Palakal, MathewInternational Journal of Virtual Reality, vol. 8, (no. 4), pp. 72, 2015-11-09.
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DEEPEN: A negation detection system for clinical text incorporating dependency relation into NegExMehrabi, Saeed⋅Mehrabi, Saeed⋅Krishnan, Anand⋅Krishnan, Anand⋅Sohn, Sunghwan⋅Sohn, Sunghwan⋅Roch, Alexandra M⋅Roch, Alexandra M⋅Schmidt, Heidi⋅Schmidt, Heidi⋅Kesterson, Joe⋅Kesterson, Joe⋅Beesley, Chris⋅Beesley, Chris⋅Dexter, Paul⋅Dexter, Paul⋅Max Schmidt, C⋅Max Schmidt, C⋅Liu, Hongfang⋅Liu, Hongfang⋅Palakal, Mathew and Palakal, MathewJournal of Biomedical Informatics, vol. 54, pp. 219, April 2015.
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Identification of Patients with Family History of Pancreatic Cancer--Investigation of an NLP System PortabilityMehrabi, Saeed⋅Mehrabi, Saeed⋅Mehrabi, Saeed⋅Krishnan, Anand⋅Krishnan, Anand⋅Krishnan, Anand⋅Roch, Alexandra M⋅Roch, Alexandra M⋅Roch, Alexandra M⋅Schmidt, Heidi⋅Schmidt, Heidi⋅Schmidt, Heidi⋅Li, DingCheng⋅Li, DingCheng⋅Li, DingCheng⋅Kesterson, Joe⋅Kesterson, Joe⋅Kesterson, Joe⋅Beesley, Chris⋅Beesley, Chris⋅Beesley, Chris⋅Dexter, Paul⋅Dexter, Paul⋅Dexter, Paul⋅Schmidt, Max⋅Schmidt, Max⋅Schmidt, Max⋅Palakal, Mathew⋅Palakal, Mathew⋅Palakal, Mathew⋅Liu, Hongfang⋅Liu, Hongfang and Liu, HongfangStudies in health technology and informatics, vol. 216, pp. 604, 2015-00-00.
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The Axolotl Fibula as a Model for the Induction of Regeneration across Large Segment Defects in Long Bones of the ExtremitiesChen, Xiaoping⋅Chen, Xiaoping⋅Chen, Xiaoping⋅Chen, Xiaoping⋅Chen, X.⋅Song, F.⋅Song, Fengyu⋅Song, Fengyu⋅Song, Fengyu⋅Song, Fengyu⋅Jhamb, Deepali⋅Jhamb, D.⋅Jhamb, Deepali⋅Jhamb, Deepali⋅Jhamb, Deepali⋅Li, Jiliang⋅Li, Jiliang⋅Li, Jiliang⋅Li, Jiliang⋅Li, J.⋅Bottino, Marco⋅Bottino, M.C.⋅Bottino, Marco C⋅Bottino, Marco C⋅Bottino, Marco C⋅Palakal, Mathew J⋅Palakal, M.J.⋅Palakal, Mathew J⋅Palakal, Mathew⋅Palakal, Mathew J⋅Stocum, David L⋅Stocum, David L⋅Stocum, David L⋅Stocum, David and Stocum, D.L.PLoS One, vol. 10, (no. 6), pp. e0130819, 20150601.
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2014
Proteomic analysis of fibroblastema formation in regenerating hind limbs of Xenopus laevis froglets and comparison to axolotlRao, Nandini⋅Rao, Nandini⋅Rao, Nandini⋅Song, Fengyu⋅Song, Fengyu⋅Song, Fengyu⋅Jhamb, Deepali⋅Jhamb, Deepali⋅Jhamb, Deepali⋅Wang, Mu⋅Wang, Mu⋅Wang, Mu⋅Milner, Derek⋅Milner, Derek J⋅Milner, Derek J⋅Price, Nathaniel M⋅Price, Nathaniel M⋅Price, Nathaniel⋅Belecky Adams, Teri L⋅Belecky-Adams, Teri L⋅Belecky-Adams, Teri⋅Palakal, Mathew J⋅Palakal, Mathew J⋅Palakal, Mathew⋅Cameron, Jo⋅Cameron, Jo⋅Cameron, Jo A⋅Li, Bingbing⋅Li, Bingbing⋅Li, Bingbing⋅Chen, Xiaoping⋅Chen, Xiaoping⋅Chen, Xiaoping⋅Stocum, David L⋅Stocum, David and Stocum, David LBMC Developmental Biology, vol. 14, (no. 1), pp. 32, 20140101.
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2013
An efficient pancreatic cyst identification methodology using natural language processingMehrabi, Saeed⋅Mehrabi, Saeed⋅Mehrabi, Saeed⋅Schmidt, C M⋅Schmidt, C Max⋅Schmidt, C Max⋅Waters, Joshua A⋅Waters, Joshua A⋅Waters, Joshua A⋅Beesley, Chris⋅Beesley, Chris⋅Beesley, Chris⋅Krishnan, Anand⋅Krishnan, Anand⋅Krishnan, Anand⋅Kesterson, Joe⋅Kesterson, Joe⋅Kesterson, Joe⋅Dexter, Paul⋅Dexter, Paul⋅Dexter, Paul⋅Al-Haddad, Mohammed A⋅Al-Haddad, Mohammed A⋅Al-Haddad, Mohammed A⋅Tierney, William M⋅Tierney, William M⋅Tierney, William M⋅Palakal, Mathew⋅Palakal, Mathew and Palakal, MathewStudies in health technology and informatics, vol. 192, pp. 822, 2013-00-00.
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Systems biology approach to stage-wise characterization of epigenetic genes in lung adenocarcinomaPradhan, Meeta⋅Desai, Akshay and Palakal, MathewBMC Systems Biology, vol. 7, (no. 1), pp. 141, 20130101.
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2012
A systems biology approach to the global analysis of transcription factors in colorectal cancer.Pradhan, Meeta P⋅Prasad, Nagendra K and Palakal, Mathew JBMC cancer, vol. 12, pp. 331, 2012.
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Cliques for the identification of gene signatures for colorectal cancer across population.Pradhan, Meeta P⋅Nagulapalli, Kshithija and Palakal, Mathew JBMC systems biology, vol. 6 Suppl 3, pp. S17, 2012.
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Elucidating gene signatures that control the circadian rhythm in cyanobacteria using bioinformatics methodsNandu, Tulip⋅Pradhan, Meeta and Palakal, MathewBMC Bioinformatics, vol. 13, (no. Suppl 18), pp. A9, 20120101.
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2011
Advances in bioinformatics and computational biologySouza, Osmar⋅Telles, Guilherme and Palakal, Mathew2011.
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Leveraging health social networking communities in translational researchWebster, Yue W⋅Dow, Ernst R⋅Koehler, Jacob⋅Gudivada, Ranga C and Palakal, Mathew JJournal of Biomedical Informatics, vol. 44, (no. 4), pp. 544, 2011.
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Network based transcription factor analysis of regenerating axolotl limbsJhamb, Deepali⋅Jhamb, Deepali⋅Rao, Nandini⋅Rao, Nandini⋅Milner, Derek J⋅Milner, Derek J⋅Song, Fengyu⋅Song, Fengyu⋅Cameron, Jo A⋅Cameron, Jo Ann⋅Stocum, David L⋅Stocum, David L⋅Palakal, Mathew J and Palakal, Mathew JBMC bioinformatics, vol. 12, (no. 1), pp. 80, 2011-Mar-18.
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2010
Multi-way association extraction and visualization from biological text documents using hyper-graphs: applications to genetic association studies for diseases.Mukhopadhyay, Snehasis⋅Palakal, Mathew J and Maddu, KalyanArtificial intelligence in medicine, vol. 49, (no. 3), pp. 145-54, 2010/Jul.
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2009
22nd annual ACM symposium on applied computingPalakal, MathewInternational journal of data mining and bioinformatics, vol. 3, (no. 1), pp. 1, 2009-00-00.
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An on demand data integration model for biological databasesPalakal, Mathew J and Naidu, PavithraInternational Journal of Data Mining and Bioinformatics, vol. 3, (no. 1), pp. 40-54, 2009.
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Automatic Surface Scanning of 3D ArtifactsFang, Shiaofen⋅Fang, Shiaofen⋅George, Basil⋅George, Basil⋅Palakal, Mathew and Palakal, MathewInternational Journal of Virtual Reality, vol. 8, (no. 4), pp. 72, 2009-01-01.
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Proteomic analysis of blastema formation in regenerating axolotl limbsRao, Nandini⋅Rao, Nandini⋅Jhamb, Deepali⋅Jhamb, Deepali⋅Milner, Derek⋅Milner, Derek J⋅Li, Bingbing⋅Li, Bingbing⋅Song, Fengyu⋅Song, Fengyu⋅Wang, Mu⋅Wang, Mu⋅Voss, Stephen Randal⋅Voss, S⋅Palakal, Mathew⋅Palakal, Mathew⋅King, Michael W⋅King, Michael⋅Saranjami, Behnaz⋅Saranjami, Behnaz⋅Nye, Holly⋅Nye, Holly L⋅Cameron, Jo A⋅Cameron, Jo⋅Stocum, David and Stocum, David LBMC Biology, vol. 7, (no. 1), pp. 83, 20090101.
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2008
Computational simulation of multi-pit corrosion process in materialsPidaparti, Ramana M⋅Pidaparti, Ramana M⋅Fang, Long⋅Fang, Long⋅Palakal, Mathew J and Palakal, Mathew JComputational Materials Science, vol. 41, (no. 3), pp. 265, 2008.
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Discovering implicit protein-protein interactions in the cell cycle using bioinformatics approaches.Palakal, Mathew⋅Palakal, Mathew J⋅Sebastian, Thomas⋅Sebastian, Thomas⋅Stocum, David L and Stocum, DavidJournal of biomedical science, vol. 15, (no. 3), pp. 317-31, 2008/May.
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