138 Publications (Page 5 of 6)
2010
Identification and genomic analysis of transcription factors in archaeal genomes exemplifies their functional architecture and evolutionary origin.
Pérez-Rueda, Ernesto and Janga, Sarath C
Molecular biology and evolution, vol. 27, (no. 6), pp. 1449-59, 2010/Jun. | Journal Article
 
-Book chapter-
Janga, S.C. and Madan Babu, M.
In Transcriptional regulatory networks. (pp. 14-35). 2010
2009
Dissecting the expression dynamics of RNA-binding proteins in posttranscriptional regulatory networks.
Mittal, Nitish⋅Roy, Nilanjan⋅Babu, M Madan and Janga, Sarath Chandra
Proceedings of the National Academy of Sciences of the United States of America, vol. 106, (no. 48), pp. 20300-20305, December 1, 2009. | Journal Article
 
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins.
Hu, Pingzhao⋅Janga, Sarath C⋅Babu, Mohan⋅Díaz-Mejía, J J⋅Butland, Gareth⋅Yang, Wenhong⋅Pogoutse, Oxana⋅Guo, Xinghua⋅Phanse, Sadhna⋅Wong, Peter⋅Chandran, Shamanta⋅Christopoulos, Constantine⋅Nazarians-Armavil, Anaies⋅Nasseri, Negin K⋅Musso, Gabriel⋅Ali, Mehrab⋅Nazemof, Nazila⋅Eroukova, Veronika⋅Golshani, Ashkan⋅Paccanaro, Alberto⋅Greenblatt, Jack F⋅Moreno-Hagelsieb, Gabriel and Emili, Andrew
PLoS biology, vol. 7, (no. 4), pp. e96, 2009/Apr/28. | Journal Article
 
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins.
Hu, P.⋅Janga, S.C.⋅Babu, M.⋅Díaz-Mejía, J.J.⋅Butland, G.⋅Yang, W.⋅Pogoutse, O.⋅Guo, X.⋅Phanse, S.⋅Wong, P.⋅Chandran, S.⋅Christopoulos, C.⋅Nazarians-Armavil, A.⋅Nasseri, N.K.⋅Musso, G.⋅Ali, M.⋅Nazemof, N.⋅Eroukova, V.⋅Golshani, A.⋅Paccanaro, A.⋅Greenblatt, J.F.⋅Moreno-Hagelsieb, G. and Emili, A.
 
Interfacing systems biology and synthetic biology.
Lister, Allyson⋅Charoensawan, Varodom⋅De, Subhajyoti⋅James, Katherine⋅Janga, Sarath C and Huppert, Julian L
Genome biology, vol. 10, (no. 6), pp. 309, 2009. | Journal Article
 
Interfacing systems biology and synthetic biology.
Lister, Allyson⋅Lister, A.⋅Charoensawan, V.⋅Charoensawan, Varodom⋅De, Subhajyoti⋅De, S.⋅James, K.⋅James, Katherine⋅Janga, S.C.⋅Janga, Sarath Chandra⋅Huppert, J. and Huppert, Julian
 
Plasticity of transcriptional machinery in bacteria is increased by the repertoire of regulatory families.
Janga, Sarath C and Pérez-Rueda, Ernesto
Computational biology and chemistry, vol. 33, (no. 4), pp. 261-8, 2009/Aug. | Journal Article
 
Scaling relationship in the gene content of transcriptional machinery in bacteria.
Pérez-Rueda, Ernesto⋅Janga, Sarath C and Martínez-Antonio, Agustino
Molecular bioSystems, vol. 5, (no. 12), pp. 1494-501, 2009/Dec. | Journal Article
 
Structure and organization of drug-target networks: insights from genomic approaches for drug discovery.
Janga, Sarath C and Tzakos, Andreas
Molecular bioSystems, vol. 5, (no. 12), pp. 1536-48, 2009/Dec. | Journal Article
 
Transcriptional regulation shapes the organization of genes on bacterial chromosomes.
Janga, Sarath C⋅Salgado, Heladia and Martínez-Antonio, Agustino
Nucleic acids research, vol. 37, (no. 11), pp. 3680-8, 2009/Jun. | Journal Article
 
Transcript stability in the protein interaction network of Escherichia coli.
Janga, Sarath C and Babu, M M
Molecular bioSystems, vol. 5, (no. 2), pp. 154-62, 2009/Feb. | Journal Article
2008
Abstracts of the Fourth International Society for Computational Biology (ISCB) Student Council Symposium. Toronto, Canada. July 18, 2008.
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Abstracts of the Fourth International Society for Computational Biology (ISCB) Student Council Symposium. Toronto, Canada. July 18, 2008.
 
Eukaryotic gene regulation in three dimensions and its impact on genome evolution.
Babu, M M⋅Janga, Sarath C⋅de Santiago, Ines and Pombo, Ana
Current opinion in genetics & development, vol. 18, (no. 6), pp. 571-82, 2008/Dec. | Journal Article
 
Functional organisation of Escherichia coli transcriptional regulatory network
Martínez-Antonio, Agustino⋅Janga, Sarath Chandra and Thieffry, Denis
Journal of Molecular Biology, vol. 381, (no. 1), pp. 247, 2008-08-01. | Journal Article
 
Highlights from the Fourth International Society for Computational Biology Student Council Symposium at the Sixteenth Annual International Conference on Intelligent Systems for Molecular Biology
Peixoto, Lucia⋅Peixoto, Lucia⋅Gehlenborg, Nils⋅Gehlenborg, Nils⋅Janga, Sarath Chandra and Janga, Sarath
BMC Bioinformatics, vol. 9, (no. S10), pp. I1, 2008-10-00. | Journal Article
 
Network-based approaches for linking metabolism with environment.
Janga, Sarath Chandra and Babu, M Madan
Genome biology, vol. 9, (no. 11), pp. 239, 2008. | Journal Article
 
Network-based approaches for linking metabolism with environment.
Janga, S.C. and Babu, M.M.
 
Operons and the effect of genome redundancy in deciphering functional relationships using phylogenetic profiles.
Moreno Hagelsieb, Gabriel and Janga, Sarath C
Proteins, vol. 70, (no. 2), pp. 344-52, 2008/Feb/1. | Journal Article
 
Ten simple rules for organizing a scientific meeting.
Corpas, Manuel⋅Corpas, Manuel⋅Corpas, Manuel⋅Gehlenborg, Nils⋅Gehlenborg, Nils⋅Gehlenborg, Nils⋅Janga, Sarath C⋅Janga, Sarath Chandra⋅Janga, Sarath C⋅Bourne, Philip E⋅Bourne, Philip E and Bourne, Philip E
PLoS computational biology, vol. 4, (no. 6), pp. e1000080, 2008/Jun. | Journal Article
 
Transcriptional regulation constrains the organization of genes on eukaryotic chromosomes
Janga, Sarath C⋅Collado-Vides, Julio and Babu, M M
Proceedings of the National Academy of Sciences of the United States of America, vol. 105, (no. 41), Oct 14, 2008. | Journal Article
2007
Conservation of transcriptional sensing systems in prokaryotes: A perspective from Escherichia coli
Salgado, H.⋅Martinez-Antonio, A. and Janga, Sarath C
FEBS Letters, vol. 581, (no. 18), pp. 3499-3506, 2007. | Journal Article
 
Coordination logic of the sensing machinery in the transcriptional regulatory network of Escherichia coli.
Janga, Sarath C⋅Salgado, Heladia⋅Martínez-Antonio, Agustino and Collado-Vides, Julio
Nucleic acids research, vol. 35, (no. 20), pp. 6963-72, 2007. | Journal Article
 
Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology
Gehlenborg, Nils⋅Corpas, Manuel and Janga, Sarath
BMC Bioinformatics, vol. 8, (no. Suppl 8), pp. I1, 2007-00-00. | Journal Article