46 Publications (Page 1 of 2)
2023
Partial spontaneous intersubunit rotations in pretranslocation ribosomes.
Huang, Tianhan⋅Choi, Junhong⋅Prabhakar, Arjun⋅Puglisi, Joseph D and Petrov, Alexey
Proceedings of the National Academy of Sciences of the United States of America, vol. 120, (no. 41), pp. e2114979120, October 10, 2023. | Journal Article
 
Sordarin bound eEF2 unlocks spontaneous forward and reverse translocation on CrPV IRES.
Ou, Zheren and Petrov, Alexey
Nucleic acids research, June 7, 2023. | Journal Article
2019
eIF5B gates the transition from translation initiation to elongation
Wang, Jinfan⋅Wang, Jinfan⋅Johnson, Alex G⋅Johnson, Alex G⋅Lapointe, Christopher P⋅Lapointe, Christopher P⋅Choi, Junhong⋅Choi, Junhong⋅Prabhakar, Arjun⋅Prabhakar, Arjun⋅Chen, Dong-Hua⋅Chen, Dong-Hua⋅Petrov, Alexey N⋅Petrov, Alexey N⋅Puglisi, Joseph D and Puglisi, Joseph D
Nature, vol. 573, (no. 7775), pp. 605-2,608A-608N, Sep 26, 2019. | Journal Article
2018
2′-O-methylation in mRNA disrupts tRNA decoding during translation elongation
Choi, Junhong⋅Choi, Junhong⋅Indrisiunaite, Gabriele⋅Indrisiunaite, Gabriele⋅DeMirci, Hasan⋅DeMirci, Hasan⋅Ieong, Ka-Weng⋅Ieong, Ka-Weng⋅Wang, Jinfan⋅Wang, Jinfan⋅Petrov, Alexey⋅Petrov, Alexey⋅Prabhakar, Arjun⋅Prabhakar, Arjun⋅Rechavi, Gideon⋅Rechavi, Gideon⋅Dominissini, Dan⋅Dominissini, Dan⋅He, Chuan⋅He, Chuan⋅Ehrenberg, Måns⋅Ehrenberg, Måns⋅Puglisi, Joseph D and Puglisi, Joseph D
Nature structural & molecular biology, vol. 25, (no. 3), pp. 216, 2018-03-00. | Journal Article
 
Fluorescently-tagged human eIF3 for single-molecule spectroscopy
Johnson, Alex G⋅Petrov, Alexey N⋅Fuchs, Gabriele⋅Majzoub, Karim⋅Grosely, Rosslyn⋅Choi, Junhong and Puglisi, Joseph D
Nucleic Acids Research, vol. 46, (no. 2), pp. e8, 20180125. | Journal Article
 
How 2'-O-Methylation in mRNA Disrupts tRNA Decoding during Translation Elongation
Choi, Junhong⋅Indrisiunaite, Gabriele⋅DeMirci, Hasan⋅Ieong, Ka-Weng⋅Wang, Jinfan⋅Petrov, Alexey⋅Prabhakar, Arjun⋅Rechavi, Gideon⋅Dominissini, Dan⋅He, Chuan⋅Ehrenberg, Måns and Puglisi, Joseph D
Biophysical Journal, vol. 114, (no. 3), pp. 592a, 2018-02-02. | Journal Article
2017
Dynamic basis of fidelity and speed in translation: Coordinated multistep mechanisms of elongation and termination
Prabhakar, Arjun⋅Choi, Junhong⋅Wang, Jinfan⋅Petrov, Alexey and Puglisi, Joseph D
Protein Science, vol. 26, (no. 7), pp. 1362, 2017-07-00. | Journal Article
 
Dynamics of IRES-mediated translation
Johnson, Alex G⋅Johnson, Alex G⋅Grosely, Rosslyn⋅Grosely, Rosslyn⋅Petrov, Alexey N⋅Petrov, Alexey N⋅Puglisi, Joseph D and Puglisi, Joseph D
Philosophical transactions of the Royal Society of London. Series B, Biological sciences, vol. 372, (no. 1716), pp. 20160177, 2017-03-19. | Journal Article
 
Dynamics of IRES-mediated translation
Johnson, Alex G⋅Petrov, Alexey N and Puglisi, Joseph D
Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 372, (no. 1716), pp. 20160177-20160177, Mar 19, 2017. | Journal Article
 
Long-Read Sequencing of Human Cytomegalovirus Transcriptome Reveals RNA Isoforms Carrying Distinct Coding Potentials
Balázs, Zsolt⋅Balázs, Zsolt⋅Tombácz, Dóra⋅Tombácz, Dóra⋅Szűcs, Attila⋅Szűcs, Attila⋅Csabai, Zsolt⋅Csabai, Zsolt⋅Megyeri, Klára⋅Megyeri, Klára⋅Petrov, Alexey N⋅Petrov, Alexey N⋅Snyder, Michael⋅Snyder, Michael⋅Boldogkői, Zsolt and Boldogkői, Zsolt
Scientific reports, vol. 7, (no. 1), pp. 9, 2017-11-22. | Journal Article
 
Oxysterol, 5α-cholestan-3-one, modulates a contractile response to β2-adrenoceptor stimulation in the mouse atria: Involvement of NO signaling
Sytchev, Vaycheslav I⋅Odnoshivkina, Yulia G⋅Ursan, Roman V and Petrov, Alexey M
Life Sciences, vol. 188, pp. 140, 2017-11-01. | Journal Article
 
Post-termination Ribosome Intermediate Acts as the Gateway to Ribosome Recycling
Prabhakar, Arjun⋅Capece, Mark C⋅Petrov, Alexey⋅Choi, Junhong and Puglisi, Joseph D
Cell Reports, vol. 20, (no. 1), pp. 172, 2017-07-05. | Journal Article
2016
Distinct α2 Na,K-ATPase membrane pools are differently involved in early skeletal muscle remodeling during disuse
Kravtsova, Violetta V⋅Kravtsova, Violetta V⋅Petrov, Alexey M⋅Petrov, Alexey M⋅Matchkov, Vladimir V⋅Matchkov, Vladimir V⋅Bouzinova, Elena V⋅Bouzinova, Elena V⋅Vasiliev, Alexander N⋅Vasiliev, Alexander N⋅Benziane, Boubacar⋅Benziane, Boubacar⋅Zefirov, Andrey L⋅Zefirov, Andrey L⋅Chibalin, Alexander V⋅Chibalin, Alexander V⋅Heiny, Judith A⋅Heiny, Judith A⋅Krivoi, Igor I and Krivoi, Igor I
The Journal of general physiology, vol. 147, (no. 2), pp. 188, 2016-Feb. | Journal Article
 
Multiple Parallel Pathways of Translation Initiation on the CrPV IRES
Petrov, Alexey⋅Petrov, Alexey⋅Grosely, Rosslyn⋅Grosely, Rosslyn⋅Chen, Jin⋅Chen, Jin⋅O’Leary, Seán E⋅O'Leary, Seán E⋅Puglisi, Joseph D and Puglisi, Joseph D
Molecular Cell, vol. 62, (no. 1), pp. 103, 2016-04-07. | Journal Article
 
N6-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics
Choi, Junhong⋅Choi, Junhong⋅Choi, Junhong⋅Ieong, Ka-Weng⋅Ieong, Ka-Weng⋅Ieong, Ka-Weng⋅Demirci, Hasan⋅Demirci, Hasan⋅Demirci, Hasan⋅Chen, Jin⋅Chen, Jin⋅Chen, Jin⋅Petrov, Alexey⋅Petrov, Alexey⋅Petrov, Alexey⋅Prabhakar, Arjun⋅Prabhakar, Arjun⋅Prabhakar, Arjun⋅O'Leary, Seán E⋅O'Leary, Seán E⋅O'Leary, Sean⋅Dominissini, Dan⋅Dominissini, Dan⋅Dominissini, Dan⋅Rechavi, Gideon⋅Rechavi, Gideon⋅Rechavi, Gideon⋅Soltis, S.⋅Soltis, S Michael⋅Soltis, S Michael⋅Ehrenberg, Mans⋅Ehrenberg, Måns⋅Ehrenberg, Måns⋅Puglisi, Joseph D⋅Puglisi, Joseph D and Puglisi, Joseph
Nature Structural & Molecular Biology, vol. 23, (no. 2), pp. 115, 2016-02-00. | Journal Article
 
The molecular choreography of protein synthesis: translational control, regulation, and pathways
Chen, Jin⋅Chen, Jin⋅Choi, Junhong⋅Choi, Junhong⋅O'Leary, Seán E⋅O'Leary, Seán E⋅Prabhakar, Arjun⋅Prabhakar, Arjun⋅Petrov, Alexey⋅Petrov, Alexey⋅Grosely, Rosslyn⋅Grosely, Rosslyn⋅Puglisi, Elisabetta Viani⋅Puglisi, Elisabetta Viani⋅Puglisi, Joseph D and Puglisi, Joseph D
Quarterly reviews of biophysics, vol. 49, pp. e11, 2016-Jan. | Journal Article
2015
Cholesterol regulates contractility and inotropic response to β2-adrenoceptor agonist in the mouse atria: Involvement of Gi -protein–Akt–NO-pathway
Odnoshivkina, Yulia⋅Sytchev, Vaycheslav and Petrov, Alexey
Journal of Molecular and Cellular Cardiology, vol. 107, pp. 40, 2015. | Journal Article
 
Coupling of mRNA Structure Rearrangement to Ribosome Movement during Bypassing of Non-coding Regions
Chen, Jin⋅Chen, Jin⋅Chen, Jin⋅Coakley, Arthur⋅Coakley, Arthur⋅Coakley, Arthur⋅O'Connor, Michelle⋅O’Connor, Michelle⋅O’Connor, Michelle⋅Petrov, Alexey⋅Petrov, Alexey⋅Petrov, Alexey⋅O’Leary, Seán E⋅O'Leary, Seán E⋅O’Leary, Seán E⋅Atkins, John F⋅Atkins, John F⋅Atkins, John F⋅Puglisi, Joseph D⋅Puglisi, Joseph D and Puglisi, Joseph D
Cell, vol. 163, (no. 5), pp. 1280, 2015-11-19. | Journal Article
 
Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site
Fuchs, Gabriele⋅Fuchs, Gabriele⋅Petrov, Alexey⋅Petrov, Alexey N⋅Marceau, Caleb⋅Marceau, Caleb D⋅Popov, Lauren M⋅Popov, Lauren⋅Chen, Jin⋅Chen, Jin⋅O'Leary, Seán E⋅O'Leary, Sean⋅Wang, Richard⋅Wang, Richard⋅Carette, Jan E⋅Carette, Jan⋅Sarnow, Peter⋅Sarnow, Peter⋅Puglisi, Joseph D and Puglisi, Joseph
Proceedings of the National Academy of Sciences, USA, vol. 112, (no. 2), pp. 319, 20150101. | Journal Article
2014
Dynamic pathways of −1 translational frameshifting
Chen, Jin⋅Chen, Jin⋅Chen, Jin⋅Petrov, Alexey⋅Petrov, Alexey⋅Petrov, Alexey N⋅Johansson, Magnus⋅Johansson, Magnus⋅Johansson, Magnus⋅Tsai, Albert⋅Tsai, Albert⋅Tsai, Albert⋅O'Leary, Seán E⋅O'leary, Sean⋅O'Leary, Seán E⋅Puglisi, Joseph D⋅Puglisi, Joseph D and Puglisi, Joseph D
Nature, vol. 512, (no. 7514), pp. 332, 2014-Aug-21. | Journal Article
 
High-throughput platform for real-time monitoring of biological processes by multicolor single-molecule fluorescence
Chen, Jin⋅Chen, Jin⋅Chen, Jin⋅Dalal, Ravindra V⋅Dalal, Ravindra⋅Dalal, Ravindra V⋅Petrov, Alexey⋅Petrov, Alexey N⋅Petrov, Alexey N⋅Tsai, Albert⋅Tsai, Albert⋅Tsai, Albert⋅O'Leary, Seán⋅O'Leary, Seán E⋅O'leary, Sean⋅Chapin, Karen⋅Chapin, Karen⋅Chapin, Karen⋅Cheng, Janice⋅Cheng, Janice⋅Cheng, Janice⋅Ewan, Mark⋅Ewan, Mark⋅Ewan, Mark⋅Hsiung, Pei-Lin⋅Hsiung, Pei-Lin⋅Hsiung, Pei-Lin⋅Lundquist, Paul⋅Lundquist, Paul⋅Lundquist, Paul⋅Turner, Stephen W⋅Turner, Stephen⋅Turner, Stephen W⋅Hsu, David R⋅Hsu, David⋅Hsu, David R⋅Puglisi, Joseph D⋅Puglisi, Joseph D and Puglisi, Joseph
Proceedings of the National Academy of Sciences of the United States of America, vol. 111, (no. 2), pp. 669, 20140114. | Journal Article
 
Single-Molecule Profiling of Ribosome Translational Phenomena
Chen, Jin⋅Petrov, Alexey⋅Johansson, Magnus⋅Tsai, Albert⋅O'Leary, Seán E and Puglisi, Joseph D
Biophysical Journal, vol. 106, (no. 2), pp. 239a, 2014-01-28. | Journal Article
2013
Coordinated conformational and compositional dynamics drive ribosome translocation
Chen, Jin⋅Chen, Jin⋅Chen, Jin⋅Petrov, Alexey⋅Petrov, Alexey N⋅Petrov, Alexey⋅Tsai, Albert⋅Tsai, Albert⋅Tsai, Albert⋅O'leary, Sean⋅O'Leary, Seán E⋅O'Leary, Seán E⋅Puglisi, Joseph D⋅Puglisi, Joseph D and Puglisi, Joseph D
Nature structural & molecular biology, vol. 20, (no. 6), pp. 727, 2013-Jun. | Journal Article
 
Coordinated Conformational and Compositional Dynamics Drive Ribosome Translocation
Chen, Jin⋅Petrov, Alexey⋅Tsai Seán, Albert⋅O'Leary, E and Puglisi, Joseph D
Biophysical Journal, vol. 104, (no. 2), pp. 260a, 2013-01-29. | Journal Article
 
Dynamic Recognition of the mRNA Cap by Saccharomyces cerevisiae eIF4E
O’Leary, Seán E⋅O'leary, Sean⋅O'Leary, Seán E⋅Petrov, Alexey⋅Petrov, Alexey⋅Petrov, Alexey⋅Chen, Jin⋅Chen, Jin⋅Chen, Jin⋅Puglisi, Joseph D⋅Puglisi, Joseph D and Puglisi, Joseph D
Structure, vol. 21, (no. 12), pp. 2207, 2013-12-03. | Journal Article