67 Publications (Page 3 of 3)
iGibbs: improving Gibbs motif sampler for proteins by sequence clustering and iterative pattern sampling.
Kim, SunWang, Zhiping and Dalkilic, Mehmet M
Proteins, vol. 66, (no. 3), pp. 671-81, 2007/Feb/15. | Journal Article
A hybrid gene team model and its application to genome analysis.
Kim, SunChoi, Jeong-HyeonSaple, Amit and Yang, Jiong
Journal of bioinformatics and computational biology, vol. 4, (no. 2), pp. 171-96, 2006/Apr. | Journal Article
A mixture model-based discriminate analysis for identifying ordered transcription factor binding site pairs in gene promoters directly regulated by estrogen receptor-[alpha]
Li, LangCheng, Alfred SJin, VictorPaik, Henry HFan, MeiyunLi, XiaomanZhang, WeiRobarge, JasonBalch, CurtisDavuluri, Ramana VKim, SunHuang, Tim H and Nephew, Ken
Bioinformatics, vol. 22, (no. 18), pp. 2210, Sep 15, 2006. | Journal Article
ARCS: an aggregated related column scoring scheme for aligned sequences
Song, BinChoi, Jeong-HyeonChen, GuangyuSzymanski, JacekZhang, Guo QiangTung, Anthony KKang, JaewooKim, Sun and Yang, Jiong
Bioinformatics, vol. 22, (no. 19), pp. 2326, Oct 1, 2006. | Journal Article
BAG: a graph theoretic sequence clustering algorithm
Kim, Sun and Lee, Jason
International Journal of Data Mining and Bioinformatics, vol. 1, (no. 2), pp. 178-200, 2006. | Journal Article
COMPAM :visualization of combining pairwise alignments for multiple genomes
Lee, Do HoonChoi, Jeong-HyeonDalkilic, Mehmet M and Kim, Sun
Bioinformatics, vol. 22, (no. 2), pp. 242-4, Jan 15, 2006. | Journal Article
Data mining and bioinformatics : first international workshop, VDMB 2006, Seoul, Korea, September 11, 2006, revised selected papers / Mehmet M. Dalkilic, Sun Kim, Jiong Yang (eds.).
Dalkilic, Mehmet MKim, Sun and Yang, Jiong
Springer. 2006. | Book
Prognostic DNA Methylation Biomarkers in Ovarian Cancer
Wei, Susan HBalch, CurtisPaik, Henry HKim, Yoo-SungBaldwin, Rae LLiyanarachchi, SandyaLi, LangWang, ZailongWan, Joseph CDavuluri, Ramana VKarlan, Beth YGifford, GillianBrown, RobertKim, SunHuang, Tim H and Nephew, Ken
Clinical Cancer Research, vol. 12, (no. 9), pp. 2788-2794, 2006. | Journal Article
REFINEMENT: a search framework for the identification of interferon-responsive elements in DNA sequences--a case study with ISRE and GAS.
Tsukahara, TakumaKim, Sun and Taylor, Milton W
Computational biology and chemistry, vol. 30, (no. 2), pp. 134-147, April 2006. | Journal Article
GAME: A simple and efficient whole genome alignment method using maximal exact match filtering
Choi, J-HCho, H-G and Kim, Sun
Computational Biology and Chemistry, vol. 29, (no. 3), pp. 244-253, 2005. | Journal Article
Gene teams with relaxed proximity constraint.
Kim, SunChoi, Jeong-Hyeon and Yang, Jiong
Proceedings / IEEE Computational Systems Bioinformatics Conference, CSB. IEEE Computational Systems Bioinformatics Conference, pp. 44-55, 2005. | Journal Article
New anti-cancer strategies: epigenetic therapies and biomarkers.
Balch, CurtisMontgomery, John SPaik, Hyun-IlKim, SunHuang, Tim H and Nephew, Ken
Frontiers in bioscience : a journal and virtual library, vol. 10, pp. 1897-931, 2005. | Journal Article
PLATCOM: a Platform for Computational Comparative Genomics
Choi, KwangminMa, YuChoi, Jeong-Heyon and Kim, Sun
Bioinformatics, vol. 21, (no. 10), pp. 2514-6, May 15, 2005. | Journal Article
The Genome of Agrobacterium tumefaciens C58: Insights into the evolution and biology of a natural genetic engineer
Sun Kim et.al and Kim, Sun
(pp. 2317-2323). 2001
AMASS: A Structured Pattern Matching Approach to Shotgun Sequence Assembly
Kim, Sun and Segre, Alberto M
Journal of Computational Biology, vol. 6, (no. 2), pp. 163-186, 1999. | Journal Article
“A New String Matching Algorithm Using Partitioning and Hashing Eciently,”
Kim, Sun
Amass: A structured pattern matching approach to shotgun sequence assembly (Dissertation)
Kim, Sun (1997).