12 Publications
2021
Designing single-cell experiments to harvest fluctuation noise while rejecting measurement noise
2020
A parallel implementation of the Finite State Projection algorithm for the solution of the Chemical Master Equation
Vo, Huy D and Munsky, Brian E
Cold Spring Harbor Laboratory
 
Visualization and Modeling of Inhibition of IL-1β and TNFα mRNA Transcription at the Single-Cell Level
2019
Bayesian Estimation for Stochastic Gene Expression Using Multifidelity Models
Vo, Huy D.⋅Fox, Zachary⋅Baetica, Ania and Munsky, Brian
The Journal of Physical Chemistry B, vol. 123, pp. 2217-2234. | Journal Article
2018
Bayesian estimation for stochastic gene expression using multifidelity models
Vo, Huy D⋅Fox, Zachary R⋅Baetica, Ania and Munsky, Brian
Cold Spring Harbor Laboratory
2017
An adaptive solution to the chemical master equation using tensors
Vo, Huy D⋅Vo, H.D.⋅Sidje, R.B. and Sidje, Roger B
Journal of Chemical Physics, vol. 147. | Journal Article
 
Approximating the large sparse matrix exponential using incomplete orthogonalization and Krylov subspaces of variable dimension
Vo, H.D. and Sidje, R.B.
Numerical Linear Algebra with Applications, vol. 24. | Journal Article
 
Implementation of variable parameters in the Krylov-based finite state projection for solving the chemical master equation
Vo, H.D. and Sidje, R.B.
Applied Mathematics and Computation, vol. 293, pp. 334--344. | Journal Article
2016
Computational study of p53 regulation via the chemical master equation
Vo, Huy D and Sidje, Roger B
Phys. Biol., vol. 13, pp. 035001. | Journal Article
 
Improved krylov-FSP method for solving the chemical master equation
Vo, H.D. and Sidje, R.B.
Lecture Notes in Engineering and Computer Science, vol. 2226, pp. 521-526. | Conference Proceeding
 
Solving the chemical master equation by aggregation and Krylov approximations
Vo, H.D. and Sidje, R.B.
2016 IEEE 55th Conference on Decision and Control, CDC 2016, pp. 7093-7098. | Conference Proceeding
2015
Solving the chemical master equation by a fast adaptive finite state projection based on the stochastic simulation algorithm
Sidje, R.B. and Vo, H.D.
Mathematical Biosciences, vol. 269, pp. 10--16. | Journal Article