59 Publications (Page 1 of 3)
2018
The genetic architecture of genome-wide recombination rate variation in allopolyploid wheat revealed by nested association mapping.
Jordan, Katherine W⋅Jordan, Katherine W⋅Jordan, Katherine W.⋅Wang, Shichen⋅Wang, Shichen⋅Wang, Shichen⋅He, Fei⋅He, Fei⋅He, Fei⋅Chao, Shiaoman⋅Chao, Shiaoman⋅Chao, Shiaoman⋅Lun, Yanni⋅Lun, Yanni⋅Lun, Yanni⋅Paux, Etienne⋅Paux, Etienne⋅Paux, Etienne⋅Sourdille, Pierre⋅Sourdille, Pierre⋅Sourdille, Pierre⋅Sherman, Jamie⋅Sherman, Jamie⋅Sherman, Jamie⋅Akhunova, Alina⋅Akhunova, Alina⋅Akhunova, Alina⋅Blake, Nancy K⋅Blake, Nancy K⋅Blake, Nancy K.⋅Pumphrey, Michael O⋅Pumphrey, Michael O⋅Pumphrey, Michael O.⋅Glover, Karl⋅Glover, Karl⋅Glover, Karl⋅Dubcovsky, Jorge⋅Dubcovsky, Jorge⋅Dubcovsky, Jorge⋅Talbert, Luther⋅Talbert, Luther⋅Talbert, Luther⋅Akhunov, Eduard D⋅Akhunov, Eduard D. and Akhunov, Eduard D
The Plant journal : for cell and molecular biology, June 27, 2018. | Journal Article
2017
Exome sequence genotype imputation in globally diverse hexaploid wheat accessions.
Shi, Fan⋅Shi, F.⋅Tibbits, J.⋅Tibbits, Josquin⋅Pasam, R.K.⋅Pasam, Raj K⋅Kay, Pippa⋅Kay, P.⋅Wong, Debbie⋅Wong, D.⋅Petkowski, J.⋅Petkowski, Joanna⋅Forrest, K.L.⋅Forrest, Kerrie L⋅Hayes, B.J.⋅Hayes, Ben J⋅Akhunova, Alina⋅Akhunova, A.⋅Davies, John⋅Davies, J.⋅Webb, S.⋅Webb, Steven⋅Spangenberg, G.C.⋅Spangenberg, German C⋅Akhunov, Eduard⋅Akhunov, E.⋅Hayden, M.J.⋅Hayden, Matthew J⋅Daetwyler, Hans D and Daetwyler, H.D.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, April 4, 2017. | Journal Article
 
Phylogenetic analysis of wheat cultivars in Kazakhstan based on the wheat 90 K single nucleotide polymorphism array
Turuspekov, Yerlan⋅Plieske, Joerg⋅Ganal, Martin⋅Akhunov, Eduard and Abugalieva, Saule
Plant Genetic Resources, vol. 15, (no. 1), pp. 29-35, Feb 2017. | Journal Article
2016
A whole-genome, radiation hybrid mapping resource of hexaploid wheat.
Tiwari, Vijay K⋅Heesacker, Adam⋅Riera-Lizarazu, Oscar⋅Gunn, Hilary⋅Wang, Shichen⋅Wang, Yi⋅Gu, Young Q⋅Paux, Etienne⋅Koo, Dal-Hoe⋅Kumar, Ajay⋅Luo, Ming-Cheng⋅Lazo, Gerard⋅Zemetra, Robert⋅Akhunov, Eduard⋅Friebe, Bernd⋅Poland, Jesse⋅Gill, Bikram S⋅Kianian, Shahryar and Leonard, Jeffrey M
The Plant journal : for cell and molecular biology, vol. 86, (no. 2), pp. 195-207, April 2016. | Journal Article
2015
A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes.
KW, Jordan⋅Jordan, Katherine W⋅Wang, Shichen⋅S, Wang⋅Lun, Yanni⋅Y, Lun⋅Gardiner, Laura-Jayne⋅LJ, Gardiner⋅R, MacLachlan⋅MacLachlan, Ron⋅Hucl, Pierre⋅P, Hucl⋅Wiebe, Krysta⋅K, Wiebe⋅D, Wong⋅Wong, Debbie⋅Forrest, Kerrie L⋅KL, Forrest⋅Consortium, IWGS⋅AG, Sharpe⋅Sharpe, Andrew G⋅CH, Sidebottom⋅Sidebottom, Christine Hd⋅N, Hall⋅Hall, Neil⋅E, Akhunov⋅Toomajian, Christopher⋅Close, Timothy⋅Dubcovsky, Jorge⋅Akhunova, Alina⋅Talbert, Luther⋅Bansal, Urmil K⋅Bariana, Harbans S⋅Hayden, Matthew J⋅Pozniak, Curtis⋅Jeddeloh, Jeffrey A⋅Hall, Anthony and Akhunov, Eduard
Genome biology, vol. 16, pp. 48, 2015. | Journal Article
 
A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding.
Maccaferri, Marco⋅Ricci, Andrea⋅Salvi, Silvio⋅Milner, Sara Giulia⋅Noli, Enrico⋅Martelli, Pier Luigi⋅Casadio, Rita⋅Akhunov, Eduard⋅Scalabrin, Simone⋅Vendramin, Vera⋅Ammar, Karim⋅Blanco, Antonio⋅Desiderio, Francesca⋅Distelfeld, Assaf⋅Dubcovsky, Jorge⋅Fahima, Tzion⋅Faris, Justin⋅Korol, Abraham⋅Massi, Andrea⋅Mastrangelo, Anna Maria⋅Morgante, Michele⋅Pozniak, Curtis⋅N'Diaye, Amidou⋅Xu, Steven and Tuberosa, Roberto
Plant biotechnology journal, vol. 13, (no. 5), pp. 648-663, June 2015. | Journal Article
 
Evaluation and Association Mapping of Resistance to Tan Spot and Stagonospora Nodorum Blotch in Adapted Winter Wheat Germplasm.
Liu, Zhaohui⋅El-Basyoni, Ibrahim⋅Kariyawasam, Gayan⋅Zhang, Guorong⋅Fritz, Allan⋅Hansen, Jana⋅Marais, Francois⋅Friskop, Andrew⋅Chao, Shiaoman⋅Akhunov, Eduard and Baenziger, P Stephen
Plant disease, vol. 99, (no. 10), pp. 1333-1341, October 2015. | Journal Article
 
Fine mapping and characterization of Sr21, a temperature-sensitive diploid wheat resistance gene effective against the Puccinia graminis f. sp. tritici Ug99 race group.
Chen, Shisheng⋅Rouse, Matthew N⋅Zhang, Wenjun⋅Jin, Yue⋅Akhunov, Eduard⋅Wei, Yuming and Dubcovsky, Jorge
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, vol. 128, (no. 4), pp. 645-656, April 2015. | Journal Article
 
Identification of the VERNALIZATION 4 gene reveals the origin of spring growth habit in ancient wheats from South Asia.
Kippes, Nestor⋅Debernardi, Juan M⋅Vasquez-Gross, Hans A⋅Akpinar, Bala A⋅Budak, Hikment⋅Kato, Kenji⋅Chao, Shiaoman⋅Akhunov, Eduard and Dubcovsky, Jorge
Proceedings of the National Academy of Sciences of the United States of America, vol. 112, (no. 39), pp. E5401-E5410, September 29, 2015. | Journal Article
 
Impact of the D genome and quantitative trait loci on quantitative traits in a spring durum by spring bread wheat cross
Kalous, J⋅Martin, J⋅Sherman, J⋅Heo, H-y⋅Blake, N⋅Lanning, S⋅Eckhoff, J⋅Chao, S⋅Akhunov, E and Talbert, L
Theoretical and Applied Genetics, vol. 128, (no. 9), pp. 1799-1811, Sep 2015. | Journal Article
 
Precisely mapping a major gene conferring resistance to Hessian fly in bread wheat using genotyping-by-sequencing.
Li, Genqiao⋅Wang, Ying⋅Chen, Ming Shun⋅Edae, Erena⋅Poland, Jesse⋅Akhunov, Edward⋅Chao, Shiaoman⋅Bai, Guihua⋅Carver, Brett F and Yan, Liuling
BMC genomics, vol. 16, pp. 108, 2015. | Journal Article
2014
Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing.
Henry, Isabelle M⋅IM, Henry⋅Nagalakshmi, Ugrappa⋅U, Nagalakshmi⋅MC, Lieberman⋅Lieberman, Meric C⋅KJ, Ngo⋅Ngo, Kathie J⋅KV, Krasileva⋅Krasileva, Ksenia V⋅Vasquez-Gross, Hans⋅H, Vasquez-Gross⋅Akhunova, Alina⋅A, Akhunova⋅Akhunov, Eduard⋅E, Akhunov⋅J, Dubcovsky⋅Dubcovsky, Jorge⋅Tai, Thomas H⋅TH, Tai⋅L, Comai and Comai, Luca
The Plant cell, April 11, 2014. | Journal Article
 
Linkage disequilibrium and association analysis of stripe rust resistance in wild emmer wheat (Triticum turgidum ssp. dicoccoides) population in Israel.
Sela, Hanan⋅Ezrati, Smadar⋅Ben-Yehuda, Pnina⋅Manisterski, Jacob⋅Akhunov, Eduard⋅Dvorak, Jan⋅Breiman, Adina and Korol, Abraham
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, vol. 127, (no. 11), pp. 2453-2463, November 2014. | Journal Article
 
Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe.
Middleton, Christopher P⋅Senerchia, Natacha⋅Stein, Nils⋅Akhunov, Eduard D⋅Keller, Beat⋅Wicker, Thomas and Kilian, Benjamin
PloS one, vol. 9, (no. 3), pp. e85761, 2014. | Journal Article
 
SNP Discovery for mapping alien introgressions in wheat.
Tiwari, Vijay K⋅Wang, Shichen⋅Sehgal, Sunish⋅Vrána, Jan⋅Friebe, Bernd R⋅Kubaláková, Marie⋅Chhuneja, Praveen⋅Doležel, Jaroslav⋅Akhunov, Eduard⋅Kalia, Bhanu⋅Sabir, Jamal and Gill, Bikram S
BMC genomics, vol. 15, (no. 1), pp. 273, 2014. | Journal Article
 
Tedna: a transposable element de novo assembler.
Zytnicki, Matthias⋅Akhunov, Eduard and Quesneville, Hadi
Bioinformatics (Oxford, England), vol. 30, (no. 18), pp. 2656-2658, September 15, 2014. | Journal Article
 
Using transcription of six Puccinia triticina races to identify the effective secretome during infection of wheat.
Bruce, Myron⋅Bruce, Myron⋅Neugebauer, Kerri A⋅Neugebauer, Kerri A⋅Joly, David L⋅Joly, David L⋅Migeon, Pierre⋅Migeon, Pierre⋅Cuomo, Christina A⋅Cuomo, Christina A⋅Wang, Shichen⋅Wang, Shichen⋅Akhunov, Eduard⋅Akhunov, Eduard⋅Bakkeren, Guus⋅Bakkeren, Guus⋅Kolmer, James A⋅Kolmer, James A⋅Fellers, John P and Fellers, John P
Frontiers in plant science, vol. 4, pp. 520, January 13, 2014. | Journal Article
2013
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond
Mascher, Martin⋅Richmond, Todd A⋅Gerhardt, Daniel J⋅Himmelbach, Axel⋅Clissold, Leah⋅Sampath, Dharanya⋅Ayling, Sarah⋅Steuernagel, Burkhard⋅Pfeifer, Matthias⋅D'Ascenzo, Mark⋅Akhunov, Eduard⋅Hedley, Pete E⋅Gonzales, Ana M⋅Morrell, Peter L⋅Kilian, Benjamin⋅Blattner, Frank R⋅Scholz, Uwe⋅Mayer, Klaus F⋅Flavell, Andrew⋅Muehlbauer, Gary J⋅Waugh, Robbie⋅Jeddeloh, Jeffrey A and Stein, Nils
The Plant Journal, vol. 76, (no. 3), pp. 494-505, Nov 2013. | Journal Article
 
Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat.
Akhunov, Eduard⋅Sehgal, Sunish⋅Liang, Hanquan⋅Wang, Shichen⋅Akhunova, Alina⋅Kaur, Gaganpreet⋅Li, Wanlong⋅Forrest, Kerrie L⋅See, Deven⋅Simková, Hana⋅Ma, Yaqin⋅Hayden, Matthew J⋅Luo, Mingcheng⋅Faris, Justin D⋅Dolezel, Jaroslav and Gill, Bikram S
Plant physiology, vol. 161, (no. 1), pp. 252-65, 2013/Jan. | Journal Article
 
Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars.
Cavanagh, Colin R⋅Chao, Shiaoman⋅Wang, Shichen⋅Huang, Bevan E⋅Stephen, Stuart⋅Kiani, Seifollah⋅Forrest, Kerrie⋅Saintenac, Cyrille⋅Brown Guedira, Gina⋅Akhunova, Alina⋅See, Deven R⋅Bai, Guihua⋅Pumphrey, Michael O⋅Tomar, Luxmi⋅Wong, Debbie⋅Kong, Stephan⋅Reynolds, Matthew⋅da Silva, Marta L⋅Bockelman, Harold⋅Talbert, Luther E⋅Anderson, James A⋅Dreisigacker, Susanne⋅Baenziger, P. S⋅Carter, Arron H⋅Korzun, Viktor⋅Morrell, Peter L⋅Dubcovsky, Jorge⋅Morell, Matthew K⋅Sorrells, Mark E⋅Hayden, Matthew J and Akhunov, Eduard
Proceedings of the National Academy of Sciences of the United States of America, vol. 110, (no. 20), pp. 8057-62, 2013/May/14. | Journal Article
 
Identification of Wheat Gene Sr35 That Confers Resistance to Ug99 Stem Rust Race Group
Saintenac, Cyrille⋅Zhang, Wenjun⋅Salcedo, Andres⋅Rouse, Matthew N⋅Trick, Harold N⋅Akhunov, Eduard and Dubcovsky, Jorge
Science, vol. 341, (no. 6147), pp. 783-786, Aug 16, 2013. | Journal Article
 
Population structure, genetic diversity and linkage disequilibrium in elite winter wheat assessed with SNP and SSR markers.
Würschum, Tobias⋅Langer, Simon M⋅Longin, C Friedrich H⋅Korzun, Viktor⋅Akhunov, Eduard⋅Ebmeyer, Erhard⋅Schachschneider, Ralf⋅Schacht, Johannes⋅Kazman, Ebrahim and Reif, Jochen C
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, vol. 126, (no. 6), pp. 1477-1486, June 2013. | Journal Article
 
Separating homeologs by phasing in the tetraploid wheat transcriptome.
KV, Krasileva⋅Krasileva, Ksenia V⋅V, Buffalo⋅Buffalo, Vince⋅P, Bailey⋅Bailey, Paul⋅S, Pearce⋅Pearce, Stephen⋅S, Ayling⋅Ayling, Sarah⋅F, Tabbita⋅Tabbita, Facundo⋅Soria, Marcelo⋅M, Soria⋅Wang, Shichen⋅S, Wang⋅Consortium, IWGS⋅E, Akhunov⋅Akhunov, Eduard⋅C, Uauy⋅Uauy, Cristobal⋅J, Dubcovsky and Dubcovsky, Jorge
Genome biology, vol. 14, (no. 6), pp. R66, June 25, 2013. | Journal Article
 
Sequence-based mapping of the polyploid wheat genome.
Saintenac, Cyrille⋅Jiang, Dayou⋅Wang, Shichen and Akhunov, Eduard
G3 (Bethesda, Md.), vol. 3, (no. 7), pp. 1105-1114, July 2013. | Journal Article
2012
Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome
Philippe, Romain⋅Choulet, Frédéric⋅Paux, Etienne⋅van Oeveren, Jan⋅Tang, Jifeng⋅Wittenberg, Alexander⋅Janssen, Antoine⋅van Eijk, Michiel⋅Stormo, Keith⋅Alberti, Adriana⋅Wincker, Patrick⋅Akhunov, Eduard⋅van der Vossen, Edwin and Feuillet, Catherine
BMC Genomics, vol. 13, 2012. | Journal Article