7 Publications
2013
3D quantitative analyses of angiogenic sprout growth dynamics.
Shirinifard, Abbas⋅Shirinifard, A.⋅Mccollum, C.W.⋅McCollum, Catherine W⋅Bolin, Maria B⋅Bolin, M.B.⋅Gustafsson, J..-A.⋅Gustafsson, Jan-Åke⋅Glazier, James A⋅Glazier, J.A.⋅Clendenon, S.G. and Clendenon, Sherry
Developmental dynamics : an official publication of the American Association of Anatomists, vol. 242, (no. 5), pp. 518-26, 2013/May. | Journal Article
2012
Adhesion failures determine the pattern of choroidal neovascularization in the eye: a computer simulation study.
Shirinifard, Abbas⋅Glazier, James A⋅Swat, Maciej⋅Gens, J S⋅Family, Fereydoon⋅Jiang, Yi and Grossniklaus, Hans E
PLoS computational biology, vol. 8, (no. 5), pp. e1002440, 2012. | Journal Article
 
Chapter 13 - Multi-Scale Modeling of Tissues Using CompuCell3D
Swat, Maciej H⋅Swat, M.H.⋅Thomas, G.L.⋅Thomas, Gilberto L⋅Belmonte, Julio M⋅Belmonte, J.M.⋅Shirinifard, Abbas⋅Shirinifard, A.⋅Hmeljak, D.⋅Hmeljak, Dimitrij⋅Glazier, James A and Glazier, J.A.
Methods in Cell Biology, vol. 110, pp. 325-366, 2012. | Journal Article
 
Multi-scale modeling of tissues using CompuCell3D.
Swat, Maciej H⋅Thomas, Gilberto L⋅Belmonte, Julio M⋅Shirinifard, Abbas⋅Hmeljak, Dimitrij and Glazier, James A
Methods in cell biology, vol. 110, pp. 325-66, 2012. | Journal Article
2011
Computer simulations of cell sorting due to differential adhesion.
Zhang, Ying⋅Zhang, Y.⋅Thomas, G.L.⋅Thomas, Gilberto L⋅Swat, Maciej⋅Swat, M.⋅Shirinifard, Abbas⋅Shirinifard, A.⋅Glazier, J.A. and Glazier, James A
PloS one, vol. 6, (no. 10), pp. e24999, 2011. | Journal Article
2009
3D multi-cell simulation of tumor growth and angiogenesis.
Shirinifard, Abbas⋅Gens, J S⋅Zaitlen, Benjamin L⋅Poplawski, Nikodem⋅Swat, Maciej and Glazier, James A
PloS one, vol. 4, (no. 10), pp. e7190, 2009. | Journal Article
2008
Contact-Inhibited Chemotaxis in De Novo and Sprouting Blood-Vessel Growth
Merks, Roeland M⋅Perryn, Erica D⋅Shirinifard, Abbas⋅Glazier, James A and Bourne, Philip E
PLoS Computational Biology, vol. 4, (no. 9), pp. e1000163, 2008. | Journal Article