173 Publications (Page 1 of 7)
2020
Reconstitution of siRNA Biogenesis In Vitro: Novel Reaction Mechanisms and RNA Channeling in the RNA-Directed DNA Methylation Pathway
Singh, Jasleen and Pikaard, Craig S
Cold Spring Harbor symposia on quantitative biology, pp. 39842, 2020-Apr-29. | Journal Article
2019
Analysis of siRNA Precursors Generated by RNA Polymerase IV and RNA-Dependent RNA Polymerase 2 in Arabidopsis
Blevins, Todd⋅Podicheti, Ram and Pikaard, Craig S
Methods in molecular biology (Clifton, N.J.), vol. 1933, pp. 48, 2019-00-00. | Journal Article
 
Reaction Mechanisms of Pol IV, RDR2, and DCL3 Drive RNA Channeling in the siRNA-Directed DNA Methylation Pathway
Singh, Jasleen⋅Mishra, Vibhor⋅Wang, Feng⋅Huang, Hsiao-Yun and Pikaard, Craig S
Molecular Cell, vol. 75, (no. 3), pp. 589.e5, 2019-08-08. | Journal Article
 
The NRPD1 N-terminus contains a Pol IV-specific motif that is critical for genome surveillance in Arabidopsis
Ferrafiat, Laura⋅Pflieger, David⋅Singh, Jasleen⋅Thieme, Michael⋅Böhrer, Marcel⋅Himber, Christophe⋅Gerbaud, Aude⋅Bucher, Etienne⋅Pikaard, Craig S and Blevins, Todd
Nucleic Acids Research, 2019-08-02. | Journal Article
 
The Pol IV largest subunit CTD quantitatively affects siRNA levels guiding RNA-directed DNA methylation
Wendte, Jered M⋅Haag, Jeremy R⋅Pontes, Olga M⋅Singh, Jasleen⋅Metcalf, Sara and Pikaard, Craig S
Nucleic Acids Research, 2019-07-22. | Journal Article
2017
Catalytic properties of RNA polymerases IV and V: accuracy, nucleotide incorporation and rNTP/dNTP discrimination
Marasco, Michelle⋅Li, Weiyi⋅Lynch, Michael and Pikaard, Craig S
Nucleic acids research, vol. 45, (no. 19), pp. 11326, 2017-Nov-02. | Journal Article
 
Functional Dissection of the Pol V Largest Subunit CTD in RNA-Directed DNA Methylation
Wendte, Jered M⋅Haag, Jeremy R⋅Singh, Jasleen⋅McKinlay, Anastasia⋅Pontes, Olga M and Pikaard, Craig S
Cell Reports, vol. 19, (no. 13), pp. 2808, 2017-06-27. | Journal Article
 
Hybrid incompatibility caused by an epiallele.
Blevins, Todd⋅Wang, Jing⋅Pflieger, David⋅Pontvianne, Frédéric and Pikaard, Craig S
Proceedings of the National Academy of Sciences of the United States of America, March 7, 2017. | Journal Article
 
Mutation of
Wang, Jing⋅Blevins, Todd⋅Podicheti, Ram⋅Haag, Jeremy R⋅Tan, Ek Han⋅Wang, Feng and Pikaard, Craig S
Genes & development, vol. 31, (no. 15), pp. 1601, 2017-08-01. | Journal Article
 
Mutation of Arabidopsis SMC4 identifies condensin as a corepressor of pericentromeric transposons and conditionally expressed genes
Wang, Jing⋅Blevins, Todd⋅Podicheti, Ram⋅Haag, Jeremy R⋅Tan, Ek Han⋅Wang, Feng and Pikaard, Craig S
Genes & development, vol. 31, (no. 15), pp. 1614, 2017-08-01. | Journal Article
2016
50 years of Arabidopsis research: highlights and future directions
Provart, Nicholas J⋅Provart, Nicholas⋅Provart, Nicholas J⋅Provart, Nicholas⋅Provart, Nicholas J⋅Alonso, Jose⋅Alonso, Jose⋅Alonso, Jose⋅Alonso, Jose⋅Alonso, Jose⋅Assmann, Sarah M⋅Assmann, Sarah⋅Assmann, Sarah⋅Assmann, Sarah M⋅Assmann, Sarah M⋅Bergmann, Dominique⋅Bergmann, Dominique⋅Bergmann, Dominique⋅Bergmann, Dominique⋅Bergmann, Dominique⋅Brady, Siobhan⋅Brady, Siobhan M⋅Brady, Siobhan M⋅Brady, Siobhan M⋅Brady, Siobhan⋅Brkljacic, Jelena⋅Brkljacic, Jelena⋅Brkljacic, Jelena⋅Brkljacic, Jelena⋅Brkljacic, Jelena⋅Browse, John⋅Browse, John⋅Browse, John⋅Browse, John⋅Browse, John⋅Chapple, Clint⋅Chapple, Clint⋅Chapple, Clint⋅Chapple, Clint⋅Chapple, Clint⋅Colot, Vincent⋅Colot, Vincent⋅Colot, Vincent⋅Colot, Vincent⋅Colot, Vincent⋅Cutler, Sean⋅Cutler, Sean⋅Cutler, Sean⋅Cutler, Sean⋅Cutler, Sean⋅Dangl, Jeff⋅others⋅Dangl, Jeff⋅Dangl, Jeff⋅Dangl, Jeff⋅Ehrhardt, David⋅Ehrhardt, David⋅Ehrhardt, David⋅Ehrhardt, David⋅Friesner, Joanna D⋅Friesner, Joanna⋅Friesner, Joanna D⋅D.Friesner, Joanna⋅Frommer, Wolf B⋅Frommer, Wolf⋅Frommer, Wolf⋅Frommer, Wolf B⋅Grotewold, Erich⋅Grotewold, Erich⋅Grotewold, Erich⋅Grotewold, Erich⋅Meyerowitz, Elliot⋅Meyerowitz, Elliot⋅Meyerowitz, Elliot⋅Meyerowitz, Elliot⋅Nemhauser, Jennifer⋅Nemhauser, Jennifer⋅Nemhauser, Jennifer⋅Nemhauser, Jennifer⋅Nordborg, Magnus⋅Nordborg, Magnus⋅Nordborg, Magnus⋅Nordborg, Magnus⋅Pikaard, Craig⋅Pikaard, Craig⋅Pikaard, Craig⋅Pikaard, Craig⋅Shanklin, John⋅Shanklin, John⋅Shanklin, John⋅Shanklin, John⋅Somerville, Chris⋅Somerville, Chris⋅Somerville, Chris⋅Somerville, Chris⋅Stitt, Mark⋅Stitt, Mark⋅Stitt, Mark⋅Stitt, Mark⋅Torii, Keiko⋅Torii, Keiko⋅Torii, Keiko U⋅Torii, Keiko U⋅Waese, Jamie⋅Waese, Jamie⋅Waese, Jamie⋅Waese, Jamie⋅Wagner, Doris⋅Wagner, Doris⋅Wagner, Doris⋅Wagner, Doris⋅McCourt, Peter⋅McCourt, Peter⋅McCourt, Peter and McCourt, Peter
New Phytologist, vol. 209, (no. 3), pp. 944, 20160201. | Journal Article
 
Analysis of rRNA Gene Methylation in Arabidopsis thaliana by CHEF-Conventional 2D Gel Electrophoresis.
Mohannath, Gireesha and Pikaard, Craig S
Methods in molecular biology (Clifton, N.J.), vol. 1455, pp. 183-202, 2016. | Journal Article
 
Chromosome-specific NOR inactivation explains selective rRNA gene silencing and dosage control in Arabidopsis.
Chandrasekhara, Chinmayi⋅Mohannath, Gireesha⋅Blevins, Todd⋅Pontvianne, Frederic and Pikaard, Craig S
Genes & development, vol. 30, (no. 2), pp. 177-190, January 15, 2016. | Journal Article
 
Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.
Pontvianne, Frédéric⋅Carpentier, Marie-Christine⋅Durut, Nathalie⋅Pavlištová, Veronika⋅Jaške, Karin⋅Schořová, Šárka⋅Parrinello, Hugues⋅Rohmer, Marine⋅Pikaard, Craig S⋅Fojtová, Miloslava⋅Fajkus, Jiří and Sáez-Vásquez, Julio
Cell reports, vol. 16, (no. 6), pp. 1574-1587, August 9, 2016. | Journal Article
 
Selective nucleolus organizer inactivation in Arabidopsis is a chromosome position-effect phenomenon.
Mohannath, Gireesha⋅Pontvianne, Frederic and Pikaard, Craig S
Proceedings of the National Academy of Sciences of the United States of America, November 7, 2016. | Journal Article
 
Selective nucleolus organizer inactivation inArabidopsisis a chromosome position-effect phenomenon
Mohannath, Gireesha⋅Pontvianne, Frederic and Pikaard, Craig S
Proceedings of the National Academy of Sciences, vol. 113, (no. 47), pp. 13431, 2016-11-22. | Journal Article
 
Targeting Argonaute to chromatin.
Wendte, Jered M and Pikaard, Craig S
Genes & development, vol. 30, (no. 24), pp. 2649-2650, December 15, 2016. | Journal Article
 
The RNAs of RNA-directed DNA methylation.
Wendte, Jered M and Pikaard, Craig S
Biochimica et biophysica acta, August 10, 2016. | Journal Article
2015
Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidopsis.
Blevins, Todd⋅Blevins, Todd⋅Podicheti, Ram⋅Podicheti, Ram⋅Mishra, Vibhor⋅Mishra, Vibhor⋅Marasco, Michelle⋅Marasco, Michelle⋅Wang, Jing⋅Wang, Jing⋅Rusch, Doug⋅Rusch, Doug⋅Tang, Haixu⋅Tang, Haixu⋅Pikaard, Craig S and Pikaard, Craig S
eLife, vol. 4, pp. e09591, 2015. | Journal Article
 
Subunit compositions of Arabidopsis RNA polymerases I and III reveal Pol I- and Pol III-specific forms of the AC40 subunit and alternative forms of the C53 subunit.
Ream, Thomas S⋅Haag, Jeremy R⋅Pontvianne, Frederic⋅Nicora, Carrie D⋅Norbeck, Angela D⋅Paša-Tolić, Ljiljana and Pikaard, Craig S
Nucleic acids research, vol. 43, (no. 8), pp. 4163-4178, April 30, 2015. | Journal Article
2014
A two-step process for epigenetic inheritance in Arabidopsis.
Blevins, Todd⋅Pontvianne, Frédéric⋅Cocklin, Ross⋅Podicheti, Ram⋅Chandrasekhara, Chinmayi⋅Yerneni, Satwica⋅Braun, Chris⋅Lee, Brandon⋅Rusch, Doug⋅Mockaitis, Keithanne⋅Tang, Haixu and Pikaard, Craig S
Molecular cell, vol. 54, (no. 1), pp. 30-42, 2014/Apr/10. | Journal Article
 
Epigenetic regulation in plants.
Pikaard, Craig S and Mittelsten Scheid, Ortrun
Cold Spring Harbor perspectives in biology, vol. 6, (no. 12), pp. a019315, December 1, 2014. | Journal Article
 
Functional diversification of maize RNA polymerase IV and V subtypes via alternative catalytic subunits.
Haag, Jeremy R⋅Brower-Toland, Brent⋅Krieger, Elysia K⋅Sidorenko, Lyudmila⋅Nicora, Carrie D⋅Norbeck, Angela D⋅Irsigler, Andre⋅LaRue, Huachun⋅Brzeski, Jan⋅Mc Ginnis, Karen⋅Ivashuta, Sergey⋅Pasa-Tolic, Ljiljana⋅Chandler, Vicki L and Pikaard, Craig S
Cell reports, vol. 9, (no. 1), pp. 378-390, October 9, 2014. | Journal Article
2013
Intersection of small RNA pathways in Arabidopsis thaliana sub-nuclear domains.
Pontes, Olga M⋅Vitins, Alexa⋅Ream, Thomas S⋅Hong, Evelyn⋅Pikaard, Craig S and Costa-Nunes, Pedro
PloS one, vol. 8, (no. 6), pp. e65652, 2013. | Journal Article
 
Intersection of Small RNA Pathways in Arabidopsis thaliana Sub-Nuclear Domains. e65652
Pontes, Olga M⋅Vitins, Alexa⋅Ream, Thomas S⋅Hong, Evelyn⋅Pikaard, Craig S and Costa-Nunes, Pedro
PLoS ONE, vol. 8, (no. 6), 2013. | Journal Article