10 Publications
2017
De novo design of antibody complementarity determining regions binding a FLAG tetra-peptide
Entzminger, Kevin C⋅Entzminger, Kevin⋅Entzminger, Kevin C⋅Entzminger, Kevin C⋅Hyun, Jeong-min⋅Hyun, Jeong-Min⋅Hyun, Jeong-min⋅Hyun, Jeong-min⋅Pantazes, Robert⋅Pantazes, Robert J⋅Pantazes, Robert J⋅Pantazes, Robert J⋅Patterson-orazem, Athena C⋅Patterson-orazem, Athena C⋅Patterson-Orazem, Athena C⋅Patterson-orazem, Athena⋅Qerqez, Ahlam N⋅Qerqez, Ahlam N⋅Qerqez, Ahlam N⋅Qerqez, Ahlam⋅Frye, Zach⋅Frye, Zach P⋅Frye, Zach P⋅Frye, Zach P⋅Hughes, Randall A⋅Hughes, Randall A⋅Hughes, Randall⋅Hughes, Randall A⋅Ellington, Andrew D⋅Ellington, Andrew D⋅Ellington, Andrew D⋅Ellington, Andrew⋅Lieberman, Raquel L⋅Lieberman, Raquel L⋅Lieberman, Raquel⋅Lieberman, Raquel L⋅Maranas, Costas D⋅Maranas, Costas D⋅Maranas, Costas⋅Maranas, Costas D⋅Maynard, Jennifer⋅Maynard, Jennifer A⋅Maynard, Jennifer A and Maynard, Jennifer A
Scientific reports, vol. 7, (no. 1), pp. 10295, 2017-08-31. | Journal Article
2016
Identification of disease-specific motifs in the antibody specificity repertoire via next-generation sequencing
Pantazes, Robert⋅Pantazes, Robert J⋅Reifert, Jack⋅Reifert, Jack⋅Bozekowski, Joel⋅Bozekowski, Joel⋅Ibsen, Kelly N⋅Ibsen, Kelly⋅Murray, Joseph⋅Murray, Joseph A⋅Daugherty, Patrick S and Daugherty, Patrick
Scientific reports, vol. 6, (no. 1), pp. 30312, 2016-08-02. | Journal Article
2015
Engineering pH responsive fibronectin domains for biomedical applications
Heinzelman, Pete⋅Krais, John⋅Ruben, Eliza and Pantazes, Robert
Journal of biological engineering, vol. 9, (no. 1), pp. 6, 2015-00-00. | Journal Article
 
The Iterative Protein Redesign and Optimization (IPRO) suite of programs
Pantazes, Robert J⋅Pantazes, Robert J⋅Grisewood, Matthew J⋅Grisewood, Matthew J⋅Li, Tong⋅Li, Tong⋅Gifford, Nathanael P⋅Gifford, Nathanael P⋅Maranas, Costas D and Maranas, Costas D
Journal of Computational Chemistry, vol. 36, (no. 4), pp. 263, February 5, 2015. | Journal Article
2014
OptMAVEn – A New Framework for the de novo Design of Antibody Variable Region Models Targeting Specific Antigen Epitopes
Li, Tong⋅Li, Tong⋅Pantazes, Robert J⋅Pantazes, Robert J⋅Maranas, Costas D and Maranas, Costas D
PloS one, vol. 9, (no. 8), pp. e105954, 2014-00-00. | Journal Article
2013
MAPs: a database of modular antibody parts for predicting tertiary structures and designing affinity matured antibodies
Pantazes, Robert J⋅Pantazes, Robert J⋅Maranas, Costas D and Maranas, Costas
BMC bioinformatics, vol. 14, (no. 1), pp. 168, 2013-May-30. | Journal Article
 
OptZyme: computational enzyme redesign using transition state analogues.
Grisewood, Matthew J⋅Gifford, Nathanael P⋅Pantazes, Robert J⋅Li, Ye⋅Cirino, Patrick C⋅Janik, Michael and Maranas, Costas
PloS one, vol. 8, (no. 10), pp. e75358, 2013. | Journal Article
2011
Recent advances in computational protein design
Pantazes, Robert J⋅Pantazes, Robert J⋅Grisewood, Matthew J⋅Grisewood, Matthew J⋅Maranas, Costas and Maranas, Costas D
Current Opinion in Structural Biology, vol. 21, (no. 4), pp. 472, 2011. | Journal Article
2009
Computational design of Candida boidinii xylose reductase for altered cofactor specificity
Khoury, George A⋅Khoury, George A⋅Fazelinia, Hossein⋅Fazelinia, Hossein⋅Chin, Jonathan W⋅Chin, Jonathan W⋅Pantazes, Robert J⋅Pantazes, Robert J⋅Cirino, Patrick C⋅Cirino, Patrick C⋅Maranas, Costas D and Maranas, Costas
Protein Science, vol. 18, (no. 10), pp. 2138, October 2009. | Journal Article
2007
Optimal protein library design using recombination or point mutations based on sequence-based scoring functions
Pantazes, Robert J⋅Pantazes, Robert J⋅Saraf, Manish C⋅Saraf, Manish C⋅Maranas, Costas and Maranas, Costas D
Protein Engineering, Design & Selection, vol. 20, (no. 8), pp. 373, 20070800. | Journal Article