23 Publications
2019
A new species of Bent-toed Gecko (Squamata, Gekkonidae, Cyrtodactylus) from the Shan Plateau in eastern Myanmar (Burma)
GRISMER, L. LEEWOOD, PERRY L. JRQUAH, EVAN S. HTHURA, MYINT KYAWOAKS, JAMIE R and LIN, AUNG
Zootaxa, vol. 4624, (no. 3), pp. 321, 2019-07-01. | Journal Article
 
Discovery of the westernmost population of the genus Ansonia Stoliczka (Anura, Bufonidae) with the description of a new species from the Shan Plateau of eastern Myanmar
QUAH, EVAN S. HGRISMER, L. LEEWOOD, PERRY L. JRTHURA, MYINT KYAWOAKS, JAMIE R and LIN, AUNG
Zootaxa, vol. 4656, (no. 3), pp. 571, 2019-08-14. | Journal Article
 
Taxonomic and conservation implications of population genetic admixture, mito-nuclear discordance, and male-biased dispersal of a large endangered snake, Drymarchon couperi
Folt, BrianFolt, BrianFolt, BrianBauder, JavanBauder, JavanBauder, JavanSpear, StephenSpear, StephenSpear, StephenStevenson, DirkStevenson, DirkStevenson, DirkHoffman, MichelleHoffman, MichelleHoffman, MichelleOaks, Jamie ROaks, Jamie ROaks, Jamie RWood, Jr, Perry LWood, Jr, Perry LWood, Jr, Perry LJenkins, ChristopherJenkins, ChristopherJenkins, ChristopherSteen, David ASteen, David ASteen, David AGuyer, CraigGuyer, Craig and Guyer, Craig
PloS one, vol. 14, (no. 3), pp. e0214439, 2019-00-00. | Journal Article
 
The Coevolution Effect as a Driver of Spillover
Zohdy, SarahZohdy, SarahSchwartz, Tonia SSchwartz, Tonia SOaks, Jamie R and Oaks, Jamie R
Trends in Parasitology, vol. 35, (no. 6), pp. 408, June 2019. | Journal Article
 
The comparative biogeography of Philippine geckos challenges predictions from a paradigm of climate‐driven vicariant diversification across an island archipelago
Oaks, Jamie RSiler, Cameron D and Brown, Rafe M
Evolution, vol. 73, (no. 6), pp. 1167, June 2019. | Journal Article
 
The why, when, and how of computing in biology classrooms [version 1; peer review: 1 approved]
Wright, April MSchwartz, Rachel SOaks, Jamie RNewman, Catherine E and Flanagan, Sarah P
F1000Research, vol. 8, pp. 1854, 2019. | Journal Article
2018
Full Bayesian Comparative Phylogeography from Genomic Data.
Oaks, Jamie R
Systematic biology, September 15, 2018. | Journal Article
 
Marginal likelihoods in phylogenetics: a review of methods and applications
Oaks, Jamie RCobb, Kerry AMinin, Vladimir N and Leaché, Adam D
2018-05-10. | Journal Article
2017
The Utility of Single Nucleotide Polymorphism (SNP) Data in Phylogenetics
Leaché, Adam D and Oaks, Jamie R
Annual Review of Ecology, Evolution, and Systematics, vol. 48, (no. 1), pp. 84, 20171102. | Journal Article
2015
The roles of history and ecology in chloroplast phylogeographic patterns of the bird-dispersed plant parasite Phoradendron californicum (Viscaceae) in the Sonoran Desert.
Lira-Noriega, AndrésToro-Núñez, OscarOaks, Jamie R and Mort, Mark E
American journal of botany, vol. 102, (no. 1), pp. 149-164, January 2015. | Journal Article
2014
An improved approximate-Bayesian model-choice method for estimating shared evolutionary history.
Oaks, Jamie R
BMC evolutionary biology, vol. 14, pp. 150, 2014. | Journal Article
 
Critically endangered island endemic or peripheral population of a widespread species? Conservation genetics of Kikuchi's gecko and the global challenge of protecting peripheral oceanic island endemic vertebrates
Siler, Cameron DSiler, CameronSiler, CameronOaks, JamieOaks, JamieOaks, Jamie RCobb, KerryCobb, KerryCobb, KerryOta, HidetoshiOta, HidetoshiOta, HidetoshiBrown, RafeBrown, Rafe M and Brown, Rafe
Diversity and Distributions, vol. 20, (no. 7/8), pp. 772, 20140801. | Journal Article
 
Crocodile. Animal. By Dan Wylie. London (United Kingdom): Reaktion Books. $19.95 (paper). 222 p.; ill.; index. ISBN: 978-1-178023-087-0. 2013
Oaks, Jamie R
The Quarterly Review of Biology, vol. 89, (no. 4), pp. 405, 2014-12-00. | Journal Article
 
Fossil-calibrated phylogeny and historical biogeography of Southeast Asian water monitors (Varanus salvator Complex).
Welton, Luke JWood, Perry LOaks, JamieSiler, Cameron and Brown, Rafe
Molecular phylogenetics and evolution, vol. 74, pp. 29-37, 2014/May. | Journal Article
 
Implications of uniformly distributed, empirically informed priors for phylogeographical model selection: a reply to Hickerson et al.
Oaks, Jamie RLinkem, Charles W and Sukumaran, Jeet
Evolution; international journal of organic evolution, vol. 68, (no. 12), pp. 3607-3617, December 2014. | Journal Article
 
Multiple origins of parthenogenesis, and a revised species phylogeny for the Southeast Asian butterfly lizards,Leiolepis
Grismer, Jesse LBauer, Aaron MGrismer, L. LeeThirakhupt, KumthornAowphol, AncheleeOaks, Jamie RWood, Perry LOnn, Chan KinThy, NeangCota, Micheal and Jackman, Todd
Biological Journal of the Linnean Society, vol. 113, (no. 4), pp. 1093, 2014-12-00. | Journal Article
2013
EVIDENCE FOR CLIMATE-DRIVEN DIVERSIFICATION? A CAUTION FOR INTERPRETING ABC INFERENCES OF SIMULTANEOUS HISTORICAL EVENTS
Oaks, JamieSukumaran, JeetEsselstyn, Jacob ALinkem, Charles WSiler, Cameron DHolder, Mark and Brown, Rafe
Evolution, vol. 67, (no. 4), Apr 2013. | Journal Article
 
Evolutionary Processes of Diversification in a Model Island Archipelago
Brown, RafeBrown, RafeSiler, Cameron DSiler, CameronOliveros, CarlOliveros, CarlEsselstyn, Jacob AEsselstyn, JacobDiesmos, ArvinDiesmos, Arvin CHosner, PeterHosner, Peter ALinkem, Charles WLinkem, CharlesBarley, Anthony JBarley, AnthonyOaks, Jamie ROaks, JamieSanguila, MaritesSanguila, Marites BWelton, Luke JWelton, LukeBlackburn, DavidBlackburn, David CMoyle, RobertMoyle, Robert GPeterson, A. TPeterson, A.Alcala, Angel and Alcala, Angel C
Annual Review of Ecology, Evolution, and Systematics, vol. 44, (no. 1), pp. 435, 20130101. | Journal Article
 
Multilocus phylogeny and Bayesian estimates of species boundaries reveal hidden evolutionary relationships and cryptic diversity in Southeast Asian monitor lizards.
Welton, L JSiler, CameronOaks, J RDiesmos, A C and Brown, R M
Molecular ecology, vol. 22, (no. 13), pp. 3495-510, 2013/Jul. | Journal Article
2012
Did geckos ride the Palawan raft to the Philippines?
Siler, CameronSiler, CameronOaks, JamieOaks, Jamie RWelton, Luke JWelton, LukeLinkem, Charles WLinkem, CharlesSwab, John CSwab, JohnDiesmos, Arvin CDiesmos, ArvinBrown, RafeBrown, Rafe and Rissler, Leslie
Journal of Biogeography, vol. 39, (no. 7), pp. 1234, 20120701. | Journal Article
2011
A TIME-CALIBRATED SPECIES TREE OF CROCODYLIA REVEALS A RECENT RADIATION OF THE TRUE CROCODILES
Oaks, JamieOaks, Jamie and Dudley, R.
Evolution, vol. 65, (no. 11), pp. 3297, 20111101. | Journal Article
2010
Phylogeny and biogeography of Philippine bent-toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification
Siler, CameronSiler, Cameron DOaks, Jamie ROaks, Jamie REsselstyn, Jacob AEsselstyn, Jacob ADiesmos, Arvin CDiesmos, Arvin CBrown, Rafe and Brown, Rafe M
Molecular Phylogenetics and Evolution, vol. 55, (no. 2), pp. 710, 2010. | Journal Article
2008
Life Span of a Tropical Forest Rodent, Proechimys semispinosus
Oaks, Jamie ROaks, JamieDaul, Jason MDaul, JasonAdler, Gregory H and Adler, Gregory
Journal of Mammalogy, vol. 89, (no. 4), pp. 908, 2008. | Journal Article