88 Publications (Page 1 of 4)
2026
AI-driven gene-sets, networks, pathways, and interactions analyses of multi-omics data
Yue, Z⋅Zhang, Z⋅Thanh, Q⋅Nguyen, T⋅Sembay, Z⋅Chen, H and Welner, R
Elsevier
 
A Multi‑Agent RAG Framework for Biomedical Literature Analysis
 
An AI-Enabled Single-Cell Transcriptomic Analysis Pipeline for Gene Signature Discovery in Natural Killer Cells Linked to Remission Outcomes in Chronic Myeloid Leukemia. Biology
. | Journal Article
 
Challenges of using AI-based synthetic data in Health economics and Outcomes Research. Expert Review of Pharmacoeconomics & Outcomes Research
. | Journal Article
 
Design and Development of a Novel LXRβ/PPARδ Dual Agonist for Memory Impairment and Pathology in 3xTg-AD Animal Model of Alzheimer’s Disease. ACS Chemical Biology
. | Journal Article
 
ET-RAG: An Evidence-Temporal Retrieval-Augmented Generation Framework for Biomedical Literature Analysis (Preprint)
 
GOLDEN Fusion: A Graph-Oriented Learning with Domain-Embedding Network Fusion for Generating Super Gene Sets in Functional Genomics
 
MondrianMap: Navigating Gene Set Hierarchies with Multi-Resolution Enrichment Maps
 
PAG-Agent: a biologist-oriented research assistant for context-aware pathway-level analysis and interpretation
2025
Advanced Graph–Physics Hybrid Framework (AGPHF) for Holistic Integration of AI-Driven Graph- and Physics- Methodologies to Promote Resilient Wastewater Management in Dynamic Real-World Conditions. Applied Sciences
. | Journal Article
 
A Logarithmic Compression Method for Magnitude-Rich Data: The LPPIE Approach. Technologies
. | Journal Article
 
Autonomous Decision-Making Enhancing Natural Disaster Management through Open World Machine Learning: A Systematic Review. Human-Centric Intelligent Systems
. | Journal Article
 
Biomimicry-Inspired Automated Machine Learning Fit-for-Purpose Wastewater Treatment for Sustainable Water Reuse. Water
. | Journal Article
 
BioSwarmEV Swarm Intelligence-Based Electric Vehicle Energy Consumption Model with Biological Pattern Formation
 
Coral Reef Calculus: Nature’s Equation for Pollution Control. Water
. | Journal Article
 
Development of an Integrated Microfluidic Chip for CAR T-Cell Therapy: A Preclinical Trial-on-Chip Tool. CANCER RESEARCH
. | Journal Article
 
GOALS: a novel approach for gene ontology analysis using layered shell to enhance functional insight mining in cancer genomics. CANCER RESEARCH
. | Journal Article
 
GOALS: Gene Ontology Analysis with Layered Shells for Enhanced Functional Insight and Visualization
 
Multi-Agentic Water Health Surveillance. Water
. | Journal Article
 
Prediction of cognitive impairment among Medicare beneficiaries using a machine learning approach. ARCHIVES OF GERONTOLOGY AND GERIATRICS
. | Journal Article
 
Unraveling long non-coding RNA dynamics in uveal melanoma: Insights into pathogenesis, biomarkers, and targeted therapies. CANCER RESEARCH
. | Journal Article
2024
Abstract 6414: Molecular differentiation between complete and incomplete responders to neoadjuvant therapy in rectal cancer. Cancer Research
. | Journal Article
 
Abstract 7428: S2Map: An online interactive analytical platform for quantitative signal measurement of cell Secretion Signal Map. Cancer Research
. | Journal Article
 
Body Weight Correlates with Molecular Variances in Patients with Cancer. Cancer Research
. | Journal Article
 
Data from Body Weight Correlates with Molecular Variances in Patients with Cancer