76 Publications (Page 3 of 4)
2020
Influence of Eimeria spp. Infection on Chicken Jejunal Microbiota and the Efficacy of Two Alternative Products Against the Infection.Hamilton, M.⋅Ma, X.⋅McCrea, B.A.⋅Carrisosa, M.⋅Mac Klin, K.S.⋅Zhang, C.⋅Wang, X.⋅Hauck, R.⋅Wang, X. and Hauck, R.Avian diseases.
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Phylogenomic analysis of Wolbachia strains reveals patterns of genome evolution and recombination
Wang, Xiaozhu⋅Xiong, Xiao⋅Cao, Wenqi⋅Zhang, Chao⋅Werren, John H and Wang, Xu
Genome Biology and Evolution. | Journal Article
2019
Genome assembly of the A-group Wolbachia in Nasonia oneida using linked-reads technology
Wang, Xiaozhu⋅Xiong, Xiao⋅Cao, Wenqi⋅Zhang, Chao⋅Werren, John H and Wang, Xu
Genome Biology and Evolution. | Journal Article
Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions.Rosenfeld, Cheryl S⋅Hekman, Jessica P⋅Johnson, Jennifer L⋅Lyu, Zhen⋅Ortega, Madison T⋅Joshi, Trupti⋅Mao, Jiude⋅Vladimirova, Anastasiya V⋅Gulevich, Rimma G⋅Kharlamova, Anastasiya V⋅Acland, Gregory M⋅Hecht, Erin E⋅Wang, Xu⋅Clark, Andrew G⋅Trut, Lyudmila N⋅Behura, Susanta K and Kukekova, Anna VGenes, brain, and behavior.
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2018
Genome assembly of the A-group Wolbachia in Nasonia oneida and phylogenomic analysis of Wolbachia strains revealed genome evolution and lateral gene transfer
Red fox genome assembly identifies genomic regions associated with tame and aggressive behavioursKukekova, Anna V.⋅Kukekova, Anna V⋅Johnson, Jennifer L⋅Johnson, Jennifer L.⋅Xiang, Xueyan⋅Feng, Shaohong⋅Liu, Shiping⋅Liu, Shiping⋅Rando, Halie M.⋅Rando, Halie M⋅Kharlamova, Anastasiya V⋅Kharlamova, Anastasiya V.⋅Herbeck, Yury⋅Serdyukova, Natalya A.⋅Serdyukova, Natalya A⋅⋅Xiong, Zijun⋅Beklemischeva, Violetta⋅Koepfli, Klaus-Peter⋅Klaus-Peter, Koepfli⋅Gulevich, Rimma G.⋅Gulevich, Rimma G⋅Vladimirova, Anastasiya V⋅Vladimirova, Anastasiya V.⋅Hekman, Jessica P.⋅Hekman, Jessica P⋅Perelman, Polina L.⋅Perelman, Polina L⋅Graphodatsky, Aleksander S⋅Graphodatsky, Aleksander S.⋅O’Brien, Stephen J.⋅Wang, Xu⋅Wang, Xu⋅Clark, Andrew G⋅Clark, Andrew G.⋅Acland, Gregory M⋅Acland, Gregory M.⋅Trut, Lyudmila N.⋅ and Zhang, GuojieNature Ecology & Evolution, vol. 2, pp. 1479–1491.
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TIVAN: Tissue-specific cis-eQTL single nucleotide variant annotation and predictionChen, Li⋅Chen, Li⋅Chen, L.⋅Chen, Li⋅Wang, Ye⋅Wang, Ye⋅Wang, Ye⋅Wang, Y.⋅Yao, Bing⋅Yao, Bing⋅Yao, B.⋅Yao, Bing⋅Mitra, Amit⋅Mitra, Amit⋅Mitra, Amit⋅Mitra, A.⋅Wang, Xu⋅Wang, Xu⋅Wang, X.⋅Wang, Xu⋅Qin, Xiao⋅Qin, Xiao⋅Qin, X. and Qin, XiaoBioinformatics.
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2017
Genomic imprinting does not reduce the dosage of UBE3A in neuronsHillman, Paul R⋅Hillman, Paul R⋅Hillman, Paul R.⋅Christian, Sarah G⋅Christian, Sarah G⋅Christian, Sarah G. B.⋅Doan, Ryan⋅Doan, Ryan⋅Doan, Ryan⋅Cohen, Noah D.⋅Cohen, Noah D⋅Cohen, Noah D⋅Konganti, Kranti⋅Konganti, Kranti⋅Konganti, Kranti⋅Kory, Douglas⋅Douglas, Kory⋅Kory, Douglas⋅Wang, Xu⋅Wang, Xu⋅Wang, Xu⋅Samollow, Paul B⋅Samollow, Paul B.⋅Samollow, Paul B⋅Dindot, Scott V⋅Dindot, Scott V and Dindot, Scott V.Epigenetics & Chromatin, vol. 10.
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Genomic responses to selection for tame/aggressive behaviors in the silver fox (Vulpes vulpes)Wang, Xu⋅Pipes, Lenore⋅Trut, Lyudmila N.⋅Herbeck, Yury⋅Vladimirova, Anastasiya V.⋅Gulevich, Rimma G.⋅Kharlamova, Anastasiya V.⋅Johnson, Jennifer L.⋅Acland, Gregory M.⋅Kukekova, Anna V. and Clark, Andrew G.Cold Spring Harbor Laboratory
2016
Allele-Specific Transcriptome and Methylome Analysis Reveals Stable Inheritance and Cis-Regulation of DNA Methylation in Nasonia.Wang, Xu⋅Werren, John H and Clark, Andrew GPLoS biology, vol. 14, (no. 7), pp. e1002500, July 2016.
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OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis
Rago, Alfredo⋅Gilbert, Donald G.⋅Choi, Jeong-Hyeon⋅Sackton, Timothy B.⋅Wang, Xu⋅Kelkar, Yogeshwar D.⋅Werren, John H. and Colbourne, John K.
Bmc Genomics, vol. 17. | Journal Article
2015
Genetic and epigenetic architecture of sex-biased expression in the jewel wasps Nasonia vitripennis and giraulti.Wang, Xu⋅Werren, John H and Clark, Andrew GProceedings of the National Academy of Sciences of the United States of America, vol. 112, (no. 27), pp. E3545-E3554, July 7, 2015.
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The genetic architecture of the genome-wide transcriptional response to ER stress in the mouse.Chow, Clement Y⋅Chow, Clement Y⋅Wang, Xu⋅Wang, Xu⋅Riccardi, David⋅Riccardi, David⋅Wolfner, Mariana F⋅Wolfner, Mariana F⋅Clark, Andrew G and Clark, Andrew GPLoS genetics, vol. 11, (no. 2), pp. e1004924, February 2015.
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TRIM28 Controls Genomic Imprinting through Distinct Mechanisms during and after Early Genome-wide Reprogramming.Alexander, Katherine A⋅Wang, Xu⋅Shibata, Maho⋅Clark, Andrew G⋅García-García, María J and Garcia-Garcia, Maria J.Cell reports, vol. 13, (no. 6), pp. 1194-1205, November 10, 2015.
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2014
Chromosome-wide profiling of X-chromosome inactivation and epigenetic states in fetal brain and placenta of the opossum, Monodelphis domestica.Wang, Xu⋅Douglas, Kory C⋅Vandeberg, John L⋅VandeBerg, John L.⋅Clark, Andrew G and Samollow, PaulGenome research, vol. 24, (no. 1), pp. 70-83, 2014/Jan.
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Genome-wide histone state profiling of fibroblasts from the opossum, Monodelphis domestica, identifies the first marsupial-specific imprinted gene.Douglas, Kory C⋅Wang, Xu⋅Jasti, Madhuri⋅Wolff, Abigail⋅Vandeberg, John L⋅VandeBerg, John L.⋅Clark, Andrew G and Samollow, PaulBMC genomics, vol. 15, (no. 1), pp. 89, 2014.
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Using next-generation RNA sequencing to identify imprinted genesWang, X and Clark, AHeredity, vol. 113, (no. 2), pp. 156-66, Aug 2014.
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2013
Function and evolution of DNA methylation in Nasonia vitripennis.Wang, Xu⋅Wheeler, David A⋅Avery, Amanda⋅Rago, Alfredo⋅Choi, Jeong-Hyeon⋅Colbourne, John K⋅Clark, Andrew G and Werren, John HPLoS genetics, vol. 9, (no. 10), pp. e1003872, 2013.
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Paternally expressed genes predominate in the placentaWang, Xu⋅Miller, Donald C⋅Harman, Rebecca⋅Antczak, Doug and Clark, AndrewProceedings of the National Academy of Sciences of the United States of America, vol. 110, (no. 26), Jun 25, 2013.
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2012
Random X inactivation in the mule and horse placenta.Wang, Xu⋅Miller, Donald C⋅Clark, Andrew G and Antczak, DougGenome research, vol. 22, (no. 10), pp. 1855-63, 2012/Oct.
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2011
A survey for novel imprinted genes in the mouse placenta by mRNA-seq.Wang, Xu⋅Soloway, Paul D and Clark, Andrew GGenetics, vol. 189, (no. 1), pp. 109-22, 2011/Sep.
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2010
Contrasting methods of quantifying fine structure of human recombination.Clark, Andrew G⋅Wang, Xu⋅Matise, Tara C⋅Chakravarti, A and Green, EAnnual review of genomics and human genetics, vol. 11, pp. 45-64, 2010.
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Paternally biased X inactivation in mouse neonatal brainWang, Xu⋅Soloway, Paul and Clark, AndrewGenome Biology, vol. 11, (no. 7), pp. R79-R79, 2010.
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2008
A genome-wide approach to identifying novel-imprinted genes.Pollard, Katherine S⋅Pollard, Katie⋅Serre, David⋅Serre, David⋅Wang, Xu⋅Wang, Xu⋅Tao, Heng⋅Tao, Heng⋅Grundberg, Elin⋅Grundberg, Elin⋅Hudson, Thomas J⋅Hudson, Tom⋅Clark, Andrew G⋅Clark, Andrew G⋅Frazer, Kelly and Frazer, KellyHuman genetics, vol. 122, (no. 6), pp. 625-34, 2008/Jan.
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Transcriptome-Wide Identification of Novel Imprinted Genes in Neonatal Mouse BrainWang, Xu⋅Sun, Qi⋅McGrath, Sean D⋅Mardis, Elaine R⋅Soloway, Paul⋅Clark, Andrew and Ferguson-Smith, Anne CPloS ONE, vol. 3, (no. 12), pp. e3839, 2008.
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