138 Publications (Page 4 of 6)
2011
Predicted effector molecules in the salivary secretome of the pea aphid (Acyrthosiphon pisum): a dual transcriptomic/proteomic approach.
Carolan, James CCaragea, DoinaReardon, Karen TMutti, Navdeep SDittmer, NealPappan, Kirk LCui, FengCastaneto, MarisolPoulain, JulieDossat, CaroleTagu, DenisReese, John CReeck, Gerald RWilkinson, Thomas L and Edwards, Owain R
Journal of proteome research, vol. 10, (no. 4), pp. 1505-18, 2011/Apr/1. | Journal Article
 
Predicting friendship links in social networks using a topic modeling approach
Parimi, R. and Caragea, D.
(pp. 75-86)
 
Study on regulatory motifs in arabidopsis thaliana
Bahirwani, V. and Caragea, D.
(pp. 553-555)
2010
Abstraction Augmented Markov Models.
Caragea, CorneliaSilvescu, AdrianCaragea, Doina and Honavar, Vasant
Proceedings. IEEE International Conference on Data Mining, pp. 68-77, December 13, 2010. | Journal Article
 
Animal disease event recognition and classification
Volkova, S.Caragea, D.Hsu, W.H. and Bujuru, S.
(pp. 54-61)
 
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
Kim, Hee SMurphy, TerenceXia, JingCaragea, DoinaPark, YoonseongBeeman, Richard WLorenzen, Marce DButcher, StephenManak, JRobert and Brown, Susan J
Nucleic Acids Research, vol. 38, (no. suppl_1), pp. D437-D442, 2010. | Journal Article
 
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum.
Kim, Hee SMurphy, TerenceXia, JingCaragea, DoinaPark, Yoonseong YBeeman, Richard WLorenzen, Marcé DButcher, StephenManak, J R and Brown, Susan J
Nucleic acids research, vol. 38, (no. Database issue), pp. D437-42, 2010/Jan. | Journal Article
 
Boosting biomedical entity extraction by using syntactic patterns for semantic relation discovery
Volkova, S.Caragea, D.Hsu, W.H.Drouhard, J. and Fowles, L.
(pp. 272-278)
 
Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes.
Steller, Matthew MKambhampati, Srini and Caragea, Doina
BMC genomics, vol. 11, pp. 463, 2010. | Journal Article
 
KSU KDD: Word sense induction by clustering in topic space
Elshamy, W.Caragea, D. and Hsu, W.H.
(pp. 367-370)
 
Prediction of alternatively spliced exons using Support Vector Machines
Xia, JingCaragea, Doina and Brown, Susan J
International Journal of Data Mining and Bioinformatics, vol. 4, (no. 4), pp. 411-430, 2010. | Journal Article
 
Semi-supervised prediction of protein subcellular localization using abstraction augmented Markov models
Caragea, CorneliaCaragea, DoinaSilvescu, Adrian and Honavar, Vasant
BMC Bioinformatics, vol. 11, (no. 8), pp. S6-S6, 2010. | Journal Article
 
Semi-supervised prediction of protein subcellular localization using abstraction augmented Markov models.
Caragea, CorneliaCaragea, DoinaSilvescu, Adrian and Honavar, Vasant
BMC bioinformatics, vol. 11 Suppl 8, pp. S6, 2010. | Journal Article
 
Semi-supervised sequence classification using Abstraction Augmented Markov Models
Caragea, C.Caragea, C.Silvescu, A.Silvescu, A.Caragea, D.Caragea, D.Honavar, V. and Honavar, V.
(pp. 257-264)
 
Variation in gene expression of Andropogon gerardii in response to altered environmental conditions associated with climate change
Travers, S.E.Travers, SteveTang, Z.Tang, ZhongwenCaragea, D.Caragea, DoinaGarrett, K.A.Garrett, Karen AHulbert, Scott HHulbert, S.H.Leach, Jan ELeach, J.E.Bai, J.Bai, JianfaSaleh, AmgadSaleh, A.Knapp, Alan KKnapp, A.K.Fay, Philip AFay, P.A.Nippert, J.Nippert, Jesse BSchnable, Patrick SSchnable, P.S.Smith, M.D. and Smith, Melinda D
Journal of Ecology, vol. 98, pp. 374-383. | Journal Article
2009
Computation of the semantic relatedness between words using concept clouds
Kulkarni, S. and Caragea, D.
(pp. 183-188)
 
Exploring wikipedia and DMoz as knowledge bases for engineering a user interests hierarchy for social network applications
Haridas, M. and Caragea, D.
(pp. 1238-1245)
 
Handbook of Research on Computational Methodologies in Gene Regulatory Networks
 
Incorporating graph features for predicting protein-protein interactions
Paradesi, M.S.R.Caragea, D. and Hsu, W.H.
(pp. 45-63)
 
Learning link-based classifiers from ontology-extended textual data
Caragea, C.Caragea, C.Caragea, D.Caragea, D.Honavar, V. and Honavar, V.
(pp. 354-361)
 
Learning link-based naïve bayes classifiers from ontology-extended distributed data
Caragea, C.Caragea, C.Caragea, D.Caragea, D.Honavar, V. and Honavar, V.
(pp. 1139-1146)
 
Ontology-aware classification and association rule mining for interest and link prediction in social networks
Aljandal, W.Bahirwani, V.Caragea, D. and Hsu, W.H.
(pp. 3-8)
 
Ontology-based link prediction in the livejournal social network
Caragea, D.Bahirwani, V.Aljandal, W. and Hsu, W.H.
(pp. 34-41)
 
Towards bridging the Web and the Semantic Web
Kulkarni, S. and Caragea, D.
(pp. 667-674)
2008
Exploring alternative splicing features using support vector machines
Xia, JingXia, J.Caragea, D.Caragea, D.Brown, S. and Brown, S.
(pp. 231-238)