138 Publications (Page 4 of 6)
2011
Predicted effector molecules in the salivary secretome of the pea aphid (Acyrthosiphon pisum): a dual transcriptomic/proteomic approach.
Carolan, James C⋅Caragea, Doina⋅Reardon, Karen T⋅Mutti, Navdeep S⋅Dittmer, Neal⋅Pappan, Kirk L⋅Cui, Feng⋅Castaneto, Marisol⋅Poulain, Julie⋅Dossat, Carole⋅Tagu, Denis⋅Reese, John C⋅Reeck, Gerald R⋅Wilkinson, Thomas L and Edwards, Owain R
Journal of proteome research, vol. 10, (no. 4), pp. 1505-18, 2011/Apr/1. | Journal Article
 
Predicting friendship links in social networks using a topic modeling approach
Parimi, R. and Caragea, D.
(pp. 75-86)
 
Study on regulatory motifs in arabidopsis thaliana
Bahirwani, V. and Caragea, D.
(pp. 553-555)
2010
Abstraction Augmented Markov Models.
Caragea, Cornelia⋅Silvescu, Adrian⋅Caragea, Doina and Honavar, Vasant
Proceedings. IEEE International Conference on Data Mining, pp. 68-77, December 13, 2010. | Journal Article
 
Animal disease event recognition and classification
Volkova, S.⋅Caragea, D.⋅Hsu, W.H. and Bujuru, S.
(pp. 54-61)
 
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
Kim, Hee S⋅Murphy, Terence⋅Xia, Jing⋅Caragea, Doina⋅Park, Yoonseong⋅Beeman, Richard W⋅Lorenzen, Marce D⋅Butcher, Stephen⋅Manak, JRobert and Brown, Susan J
Nucleic Acids Research, vol. 38, (no. suppl_1), pp. D437-D442, 2010. | Journal Article
 
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum.
Kim, Hee S⋅Murphy, Terence⋅Xia, Jing⋅Caragea, Doina⋅Park, Yoonseong Y⋅Beeman, Richard W⋅Lorenzen, Marcé D⋅Butcher, Stephen⋅Manak, J R and Brown, Susan J
Nucleic acids research, vol. 38, (no. Database issue), pp. D437-42, 2010/Jan. | Journal Article
 
Boosting biomedical entity extraction by using syntactic patterns for semantic relation discovery
Volkova, S.⋅Caragea, D.⋅Hsu, W.H.⋅Drouhard, J. and Fowles, L.
(pp. 272-278)
 
Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes.
Steller, Matthew M⋅Kambhampati, Srini and Caragea, Doina
BMC genomics, vol. 11, pp. 463, 2010. | Journal Article
 
KSU KDD: Word sense induction by clustering in topic space
Elshamy, W.⋅Caragea, D. and Hsu, W.H.
(pp. 367-370)
 
Prediction of alternatively spliced exons using Support Vector Machines
Xia, Jing⋅Caragea, Doina and Brown, Susan J
International Journal of Data Mining and Bioinformatics, vol. 4, (no. 4), pp. 411-430, 2010. | Journal Article
 
Semi-supervised prediction of protein subcellular localization using abstraction augmented Markov models
Caragea, Cornelia⋅Caragea, Doina⋅Silvescu, Adrian and Honavar, Vasant
BMC Bioinformatics, vol. 11, (no. 8), pp. S6-S6, 2010. | Journal Article
 
Semi-supervised prediction of protein subcellular localization using abstraction augmented Markov models.
Caragea, Cornelia⋅Caragea, Doina⋅Silvescu, Adrian and Honavar, Vasant
BMC bioinformatics, vol. 11 Suppl 8, pp. S6, 2010. | Journal Article
 
Semi-supervised sequence classification using Abstraction Augmented Markov Models
Caragea, C.⋅Caragea, C.⋅Silvescu, A.⋅Silvescu, A.⋅Caragea, D.⋅Caragea, D.⋅Honavar, V. and Honavar, V.
(pp. 257-264)
 
Variation in gene expression of Andropogon gerardii in response to altered environmental conditions associated with climate change
Travers, S.E.⋅Travers, Steve⋅Tang, Z.⋅Tang, Zhongwen⋅Caragea, D.⋅Caragea, Doina⋅Garrett, K.A.⋅Garrett, Karen A⋅Hulbert, Scott H⋅Hulbert, S.H.⋅Leach, Jan E⋅Leach, J.E.⋅Bai, J.⋅Bai, Jianfa⋅Saleh, Amgad⋅Saleh, A.⋅Knapp, Alan K⋅Knapp, A.K.⋅Fay, Philip A⋅Fay, P.A.⋅Nippert, J.⋅Nippert, Jesse B⋅Schnable, Patrick S⋅Schnable, P.S.⋅Smith, M.D. and Smith, Melinda D
Journal of Ecology, vol. 98, pp. 374-383. | Journal Article
2009
Computation of the semantic relatedness between words using concept clouds
Kulkarni, S. and Caragea, D.
(pp. 183-188)
 
Exploring wikipedia and DMoz as knowledge bases for engineering a user interests hierarchy for social network applications
Haridas, M. and Caragea, D.
(pp. 1238-1245)
 
Handbook of Research on Computational Methodologies in Gene Regulatory Networks
 
Incorporating graph features for predicting protein-protein interactions
Paradesi, M.S.R.⋅Caragea, D. and Hsu, W.H.
(pp. 45-63)
 
Learning link-based classifiers from ontology-extended textual data
Caragea, C.⋅Caragea, C.⋅Caragea, D.⋅Caragea, D.⋅Honavar, V. and Honavar, V.
(pp. 354-361)
 
Learning link-based naïve bayes classifiers from ontology-extended distributed data
Caragea, C.⋅Caragea, C.⋅Caragea, D.⋅Caragea, D.⋅Honavar, V. and Honavar, V.
(pp. 1139-1146)
 
Ontology-aware classification and association rule mining for interest and link prediction in social networks
Aljandal, W.⋅Bahirwani, V.⋅Caragea, D. and Hsu, W.H.
(pp. 3-8)
 
Ontology-based link prediction in the livejournal social network
Caragea, D.⋅Bahirwani, V.⋅Aljandal, W. and Hsu, W.H.
(pp. 34-41)
 
Towards bridging the Web and the Semantic Web
Kulkarni, S. and Caragea, D.
(pp. 667-674)
2008
Exploring alternative splicing features using support vector machines
Xia, Jing⋅Xia, J.⋅Caragea, D.⋅Caragea, D.⋅Brown, S. and Brown, S.
(pp. 231-238)