1,104 Publications (Page 4 of 45)
2011
Extraction of drug-drug interactions using all paths graph kernel
 
Extraction of drug-drug interactions using all paths graph kernel
Karnik, S.⋅Subhadarshini, A.⋅Wang, Z.⋅Rocha, L.M. and Li, L.
CEUR Workshop Proceedings, vol. 761, pp. 83-88. | Conference Proceeding
 
Prediction and Modularity in Dynamical Systems
Kolchinsky, Artemy and Rocha, Luis M
2011-06-19. | Journal Article
 
Schema redescription in cellular automata: Revisiting emergence in complex systems
Marques-Pita, M. and Rocha, L.M.
IEEE SSCI 2011 - Symposium Series on Computational Intelligence - IEEE ALIFE 2011: 2011 IEEE Symposium on Artificial Life, pp. 233-240. | Journal Article
 
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
Krallinger, Martin⋅Krallinger, Martin⋅Vazquez, Miguel⋅Vazquez, Miguel⋅Leitner, Florian⋅Leitner, Florian⋅Salgado, David⋅Salgado, David⋅Chatr-aryamontri, A.⋅Chatr-Aryamontri, Andrew⋅Chatr-Aryamontri, Andrew⋅Winter, Andrew⋅Winter, Andrew⋅Perfetto, Livia⋅Perfetto, Livia⋅Briganti, Leonardo⋅Briganti, Leonardo⋅Licata, Luana⋅Licata, Luana⋅Iannuccelli, Marta⋅Iannuccelli, Marta⋅Castagnoli, Luisa⋅Castagnoli, Luisa⋅Cesareni, Gianni⋅Cesareni, Gianni⋅Tyers, Mike⋅Tyers, Mike⋅Schneider, Gerold⋅Schneider, Gerold⋅Rinaldi, Fabio⋅Rinaldi, Fabio⋅Leaman, Robert⋅Leaman, Robert⋅Gonzalez, Graciela⋅Gonzalez, Graciela⋅Matos, Sergio⋅Matos, Sergio⋅Kim, Sun⋅Kim, Sun⋅Wilbur, W John⋅Wilbur, W J⋅Rocha, Luis⋅Rocha, Luis M⋅Shatkay, Hagit⋅Shatkay, Hagit⋅Tendulkar, Ashish V⋅Tendulkar, Ashish V⋅Agarwal, Shashank⋅Agarwal, Shashank⋅Liu, Feifan⋅Liu, Feifan⋅Wang, Xinglong⋅Wang, Xinglong⋅Rak, Rafal⋅Rak, Rafal⋅Noto, Keith⋅Noto, Keith⋅Elkan, Charles⋅Elkan, Charles P⋅Lu, Zhiyong⋅Lu, Zhiyong⋅Dogan, Rezarta I⋅Dogan, Rezarta Islamaj⋅Fontaine, Jean-Fred⋅Fontaine, Jean-Fred⋅Andrade-Navarro, Miguel A⋅Andrade-Navarro, Miguel A⋅Valencia, Alfonso and Valencia, Alfonso
BMC bioinformatics, vol. 12 Suppl 8, pp. S3, 2011. | Journal Article
2010
BioDR: Semantic indexing networks for biomedical document retrieval
Louren?o, A.⋅Lourenco, Analia⋅Carreira, Rafael⋅Glez-Peña, D.⋅Glez-Pena, Daniel⋅Méndez, J.R.⋅Mendez, Jose R⋅Carneiro, Sonia⋅Rocha, Luis M⋅Díaz, F.⋅Diaz, Fernando⋅Ferreira, Eugenio C⋅Rocha, Isabel⋅Fdez-Riverola, Florentino and Rocha, Miguel
Expert Systems with Applications, vol. 37, (no. 4), pp. 3444-3453, 2010. | Journal Article
 
Biomedical article classification using an agent-based model of T-cell cross-regulation
Abi-Haidar, A. and Rocha, L.M.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 6209 LNCS, pp. 237-249. | Journal Article
 
Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features
Kolchinsky, Artemy⋅Abi-Haidar, Alaa⋅Kaur, Jasleen⋅Hamed, Ahmed A and Rocha, Luis M
IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 7, (no. 3), pp. 400-411, 2010. | Journal Article
 
Collective classification of biomedical articles using T-cell cross-regulation
Abi-Haidar, A. and Rocha, L.M.
Artificial Life XII: Proceedings of the 12th International Conference on the Synthesis and Simulation of Living Systems, ALIFE 2010, pp. 706-713. | Journal Article
 
Collective classification of biomedical articles using T-cell cross-regulation
 
Collective classification of biomedical articles using T-cell cross-regulation
Abi-Haidar, A. and Rocha, L.M.
Artificial Life XII: Proceedings of the 12th International Conference on the Synthesis and Simulation of Living Systems, ALIFE 2010, pp. 706-713. | Conference Proceeding
2009
Biomedical text mining applied to document retrieval and semantic indexing
Lourenço, A.⋅Louren?o, A.⋅Carneiro, S.⋅Ferreira, E.C.⋅Carreira, R.⋅Rocha, L.M.⋅Glez-Peña, D.⋅Méndez, J.R.⋅Fdez-Riverola, F.⋅Diaz, F.⋅Rocha, I. and Rocha, M.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5518 LNCS, pp. 954-963. | Journal Article
 
Literature mining on pharmacokinetics numerical data: a feasibility study.
Wang, Zhiping⋅Kim, Seongho⋅Quinney, Sara K⋅Guo, Yingying⋅Hall, Stephen D⋅Rocha, Luis M and Li, Lang
Journal of biomedical informatics, vol. 42, (no. 4), pp. 726-35, 2009/Aug. | Journal Article
 
Progress in Artificial Intelligence. 14th Portuguese Conference on Artificial Intelligence, EPIA 2009, Aveiro, Portugal, October 12-15, 2009. Proceedings
2008
Adaptive spam detection inspired by a cross-regulation model of immune dynamics: A study of concept drift
Abi-Haidar, A. and Rocha, L.M.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5132 LNCS, pp. 36-47. | Journal Article
 
Adaptive spam detection inspired by the immune system
 
Adaptive spam detection inspired by the immune system
Abi-Haidar, A. and Rocha, L.M.
Artificial Life XI: Proceedings of the 11th International Conference on the Simulation and Synthesis of Living Systems, ALIFE 2008, pp. 1-8. | Journal Article
 
Adaptive spam detection inspired by the immune system
Abi-Haidar, A. and Rocha, L.M.
Artificial Life XI: Proceedings of the 11th International Conference on the Simulation and Synthesis of Living Systems, ALIFE 2008, pp. 1-8. | Conference Proceeding
 
Conceptual structure in cellular automata: The density classification task
Marques-Pita, M. and Rocha, L.M.
Artificial Life XI: Proceedings of the 11th International Conference on the Simulation and Synthesis of Living Systems, ALIFE 2008, pp. 390-397. | Conference Proceeding
 
Conceptual structure in cellular automata: The density classification task
Marques-Pita, M. and Rocha, L.M.
Artificial Life XI: Proceedings of the 11th International Conference on the Simulation and Synthesis of Living Systems, ALIFE 2008, pp. 390-397. | Journal Article
 
Conceptual structure in cellular automata: The density classification task
 
Stochastic model for scale-free networks with cutoffs.
Simas, Tiago and Rocha, Luis M
Physical review. E, Statistical, nonlinear, and soft matter physics, vol. 78, (no. 6 Pt 2), pp. 066116, 2008/Dec. | Journal Article
 
The role of conceptual structure in designing cellular automata to perform collective computation
Marques-Pita, M.⋅Mitchell, M. and Rocha, L.M.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5204 LNCS, pp. 146-163. | Journal Article
 
Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks
Abi-Haidar, Alaa⋅Kaur, Jasleen⋅Maguitman, Ana⋅Radivojac, Predrag⋅Rechtsteiner, Andreas⋅Verspoor, Karin M⋅Wang, Zhiping and Rocha, Luis M
Genome Biology, vol. 9, (no. Suppl 2), pp. S11-S11, 2008. | Journal Article
 
Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks
Abi-Haidar, Alaa⋅Kaur, Jasleen⋅Maguitman, Ana⋅Radivojac, Predrag⋅Rechtsteiner, Andreas⋅Verspoor, Karin⋅Wang, Zhiping and Rocha, Luis M
(pp. S11). BioMed Central