1,092 Publications (Page 3 of 44)
2014
Multi-scale integration and predictability in resting state brain activity.
Kolchinsky, ArtemyHeuvel, M.P.van den Heuvel, Martijn PVan Den Heuvel, Martijn P.Griffa, AlessandraHagmann, PatricRocha, Luis MSporns, OlafGoñi, Joaquin and Goñi, Joaquín
Frontiers in neuroinformatics, vol. 8, pp. 66, 2014. | Journal Article
 
Structure and dynamics affect the controllability of complex systems: a Preliminary Study. Artificial Life 14: Proceedings of the Fourteenth International Conference on the Synthesis and Simulation of Living Systems
Rocha, Luis. | Conference Proceeding
 
Structure and dynamics affect the controllability of complex systems: a Preliminary Study. Artificial Life 14: Proceedings of the Fourteenth International Conference on the Synthesis and Simulation of Living Systems
2013
An integrated pharmacokinetics ontology and corpus for text mining
Wu, Heng-YiWu, Heng-YiKarnik, ShreyasKarnik, ShreyasSubhadarshini, AbhinitaSubhadarshini, AbhinitaWang, ZhipingWang, ZhipingPhilips, SantoshPhilips, SantoshHan, XuHan, XuChiang, ChienweiChiang, ChienweiLiu, LeiLiu, LeiBoustani, MalazBoustani, MalazRocha, Luis MRocha, Luis MQuinney, Sara KQuinney, Sara KFlockhart, DavidFlockhart, DavidLi, Lang and Li, Lang
BMC Bioinformatics, vol. 14, (no. 1), pp. 35, 2013. | Journal Article
 
Canalization and control in automata networks: body segmentation in Drosophila melanogaster.
Marques-Pita, Manuel and Rocha, Luis M
PloS one, vol. 8, (no. 3), pp. e55946, 2013. | Journal Article
 
Distance Closures on Complex Networks
Simas, Tiago and Rocha, Luis M
2013-12-09. | Journal Article
 
Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions
 
Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions.
Kolchinsky, ArtemyLourenço, ALi, L and Rocha, Luis M
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, pp. 409-20, 2013. | Journal Article
2012
Correction: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature
Lourenco, AnaliaLouren?o, A.Conover, MichaelWong, AndrewNematzadeh, AzadehPan, FengxiaShatkay, Hagit and Rocha, Luis M
BMC Bioinformatics, vol. 13, (no. 1), pp. 180, 2012. | Journal Article
 
Evaluation of linear classifiers on articles containing pharmacokinetic evidence of drug-drug interactions
Kolchinsky, ArtemyLourenço, AnáliaLi, Lang and Rocha, Luis M
2012-10-02. | Journal Article
 
Semi-metric networks for recommender systems
Simas, T. and Rocha, L.M.
Proceedings of the 2012 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology Workshops, WI-IAT 2012, pp. 175-179. | Journal Article
2011
A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature.
Lourenço, AnáliaLouren?o, A.Conover, MichaelWong, AndrewNematzadeh, AzadehPan, FengxiaShatkay, Hagit and Rocha, Luis M
BMC bioinformatics, vol. 12 Suppl 8, pp. S12, 2011. | Journal Article
 
Collective classification of textual documents by guided self-organization in T-Cell cross-regulation dynamics
Abi-Haidar, A. and Rocha, L.M.
Evolutionary Intelligence, vol. 4, pp. 69-80. | Journal Article
 
Extraction of drug-drug interactions using all paths graph kernel
Karnik, S.Subhadarshini, A.Wang, Z.Rocha, L.M. and Li, L.
CEUR Workshop Proceedings, vol. 761, pp. 83-88. | Conference Proceeding
 
Extraction of drug-drug interactions using all paths graph kernel
 
Prediction and Modularity in Dynamical Systems
Kolchinsky, Artemy and Rocha, Luis M
2011-06-19. | Journal Article
 
Schema redescription in cellular automata: Revisiting emergence in complex systems
Marques-Pita, M. and Rocha, L.M.
IEEE SSCI 2011 - Symposium Series on Computational Intelligence - IEEE ALIFE 2011: 2011 IEEE Symposium on Artificial Life, pp. 233-240. | Journal Article
 
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
Krallinger, MartinKrallinger, MartinVazquez, MiguelVazquez, MiguelLeitner, FlorianLeitner, FlorianSalgado, DavidSalgado, DavidChatr-Aryamontri, AndrewChatr-Aryamontri, AndrewChatr-aryamontri, A.Winter, AndrewWinter, AndrewPerfetto, LiviaPerfetto, LiviaBriganti, LeonardoBriganti, LeonardoLicata, LuanaLicata, LuanaIannuccelli, MartaIannuccelli, MartaCastagnoli, LuisaCastagnoli, LuisaCesareni, GianniCesareni, GianniTyers, MikeTyers, MikeSchneider, GeroldSchneider, GeroldRinaldi, FabioRinaldi, FabioLeaman, RobertLeaman, RobertGonzalez, GracielaGonzalez, GracielaMatos, SergioMatos, SergioKim, SunKim, SunWilbur, W JWilbur, W JohnRocha, LuisRocha, Luis MShatkay, HagitShatkay, HagitTendulkar, Ashish VTendulkar, Ashish VAgarwal, ShashankAgarwal, ShashankLiu, FeifanLiu, FeifanWang, XinglongWang, XinglongRak, RafalRak, RafalNoto, KeithNoto, KeithElkan, Charles PElkan, CharlesLu, ZhiyongLu, ZhiyongDogan, Rezarta IslamajDogan, Rezarta IFontaine, Jean-FredFontaine, Jean-FredAndrade-Navarro, Miguel AAndrade-Navarro, Miguel AValencia, Alfonso and Valencia, Alfonso
BMC bioinformatics, vol. 12 Suppl 8, pp. S3, 2011. | Journal Article
2010
BioDR: Semantic indexing networks for biomedical document retrieval
Lourenco, AnaliaLouren?o, A.Carreira, RafaelGlez-Peña, D.Glez-Pena, DanielMendez, Jose RMéndez, J.R.Carneiro, SoniaRocha, Luis MDíaz, F.Diaz, FernandoFerreira, Eugenio CRocha, IsabelFdez-Riverola, Florentino and Rocha, Miguel
Expert Systems with Applications, vol. 37, (no. 4), pp. 3444-3453, 2010. | Journal Article
 
Biomedical article classification using an agent-based model of T-cell cross-regulation
Abi-Haidar, A. and Rocha, L.M.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 6209 LNCS, pp. 237-249. | Journal Article
 
Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features
Kolchinsky, ArtemyAbi-Haidar, AlaaKaur, JasleenHamed, Ahmed A and Rocha, Luis M
IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 7, (no. 3), pp. 400-411, 2010. | Journal Article
 
Collective classification of biomedical articles using T-cell cross-regulation
Abi-Haidar, A. and Rocha, L.M.
Artificial Life XII: Proceedings of the 12th International Conference on the Synthesis and Simulation of Living Systems, ALIFE 2010, pp. 706-713. | Conference Proceeding
 
Collective classification of biomedical articles using T-cell cross-regulation
 
Collective classification of biomedical articles using T-cell cross-regulation
Abi-Haidar, A. and Rocha, L.M.
Artificial Life XII: Proceedings of the 12th International Conference on the Synthesis and Simulation of Living Systems, ALIFE 2010, pp. 706-713. | Journal Article
2009
Biomedical text mining applied to document retrieval and semantic indexing
Lourenço, A.Louren?o, A.Carneiro, S.Ferreira, E.C.Carreira, R.Rocha, L.M.Glez-Peña, D.Méndez, J.R.Fdez-Riverola, F.Diaz, F.Rocha, I. and Rocha, M.
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5518 LNCS, pp. 954-963. | Journal Article