44 Publications (Page 1 of 2)
2023
A framework to validate fluorescently labeled DNA-binding proteins for single-molecule experiments.
Molina, Miranda⋅Way, Lindsey E⋅Ren, Zhongqing⋅Liao, Qin⋅Guerra, Bianca⋅Shields, Brandon⋅Wang, Xindan and Kim, HyeongJun
Cell reports methods, vol. 3, (no. 10), pp. 100614, October 23, 2023. | Journal Article
 
Brucella MucR acts as an H-NS-like protein to silence virulence genes and structure the nucleoid.
Barton, Ian S⋅Ren, Zhongqing⋅Cribb, Connor B⋅Pitzer, Joshua E⋅Baglivo, Ilaria⋅Martin, Daniel W⋅Wang, Xindan and Roop, R Martin
mBio, pp. e0220123, October 17, 2023. | Journal Article
 
Organization and replicon interactions within the highly segmented genome of Borrelia burgdorferi.
Ren, Zhongqing⋅Ren, Zhongqing⋅Takacs, Constantin N.⋅Takacs, Constantin N⋅Brandão, Hugo B⋅Brandao, Hugo B.⋅Jacobs Wagner, Christine⋅Jacobs-Wagner, Christine⋅Wang, Xindan and Wang, Xindan
PLoS genetics, vol. 19, (no. 7), pp. e1010857, July 2023. | Journal Article
2022
A dicentric bacterial chromosome requires XerC/D site-specific recombinases for resolution.
Liao, Qin⋅Ren, Zhongqing⋅Wiesler, Emma E⋅Fuqua, Clay and Wang, Xindan
Current biology : CB, June 28, 2022. | Journal Article
 
Centromere Interactions Promote the Maintenance of the Multipartite Genome in Agrobacterium tumefaciens.
Ren, Zhongqing⋅Liao, Qin⋅Barton, Ian S⋅Wiesler, Emma E⋅Fuqua, Clay and Wang, Xindan
mBio, pp. e0050822, May 10, 2022. | Journal Article
 
Conformation and dynamic interactions of the multipartite genome in Agrobacterium tumefaciens.
Ren, Zhongqing⋅Ren, Zhongqing⋅Liao, Qin⋅Liao, Qin⋅Karaboja, Xheni⋅Karaboja, Xheni⋅Barton, Ian S⋅Barton, Ian S.⋅Schantz, Eli G.⋅Schantz, Eli G⋅Mejia-Santana, Adrian⋅Mejia-Santana, Adrian⋅Fuqua, Clay⋅Fuqua, Clay⋅Wang, Xindan and Wang, Xindan
Proceedings of the National Academy of Sciences of the United States of America, vol. 119, (no. 6), February 8, 2022. | Journal Article
 
HBsu Is Required for the Initiation of DNA Replication in Bacillus subtilis.
Karaboja, Xheni and Wang, Xindan
Journal of bacteriology, pp. e0011922, May 12, 2022. | Journal Article
 
High-Throughput Imaging of Bacillus subtilis.
Montero Llopis, Paula⋅Stephansky, Ryan and Wang, Xindan
Methods in molecular biology (Clifton, N.J.), vol. 2476, pp. 277-292, 2022. | Journal Article
 
Identification of Genes Required for Swarming Motility in Bacillus subtilis Using Transposon Mutagenesis and High-Throughput Sequencing (TnSeq).
Sanchez, Sandra⋅Snider, Elizabeth V⋅Wang, Xindan and Kearns, Daniel B
Journal of bacteriology, pp. e0008922, May 31, 2022. | Journal Article
 
Roles of RodZ and class A PBP1b in the assembly and regulation of the peripheral peptidoglycan elongasome in ovoid-shaped cells of Streptococcus pneumoniae D39.
Lamanna, Melissa M⋅Manzoor, Irfan⋅Joseph, Merrin⋅Ye, Ziyun A⋅Benedet, Mattia⋅Zanardi, Alessia⋅Ren, Zhongqing⋅Wang, Xindan⋅Massidda, Orietta⋅Tsui, Ho-Ching T and Winkler, Malcolm E
Molecular microbiology, August 5, 2022. | Journal Article
2021
DNA-loop-extruding SMC complexes can traverse one another in vivo.
Brandão, Hugo B⋅Brandão, Hugo B⋅Ren, Zhongqing⋅Xheni, Karaboja⋅Karaboja, Xheni⋅Mirny, Leonid A⋅Mirny, Leonid A⋅ and Wang, Xindan
Nature structural & molecular biology, July 26, 2021. | Journal Article
 
Respiratory chain components are required for peptidoglycan recognition protein-induced thiol depletion and killing in Bacillus subtilis and Escherichia coli.
Yang, Chun-Kai⋅Kashyap, Des R⋅Kowalczyk, Dominik A⋅Rudner, David Z⋅Wang, Xindan⋅Gupta, Dipika and Dziarski, Roman
Scientific reports, vol. 11, (no. 1), pp. 64, January 8, 2021. | Journal Article
 
The WalR-WalK signaling pathway modulates the activities of both CwlO and LytE through control of the peptidoglycan deacetylase PdaC in Bacillus subtilis.
Dobihal, Genevieve S⋅Flores-Kim, Josué⋅Roney, Ian J⋅Wang, Xindan and Rudner, David Z
Journal of bacteriology, pp. JB0053321, December 6, 2021. | Journal Article
 
XerD unloads bacterial SMC complexes at the replication terminus.
Karaboja, Xheni⋅Ren, Zhongqing⋅Brandão, Hugo B⋅Paul, Payel⋅Rudner, David Z and Wang, Xindan
Molecular cell, January 11, 2021. | Journal Article
2019
RNA polymerases as moving barriers to condensin loop extrusion
Brandão, Hugo B⋅Paul, Payel⋅van den Berg, Aafke A⋅Rudner, David Z⋅Wang, Xindan and Mirny, Leonid A
Proceedings of the National Academy of Sciences of the United States of America, vol. 116, (no. 41), pp. 20499, 2019-10-08. | Journal Article
 
SweC and SweD are essential co-factors of the FtsEX-CwlO cell wall hydrolase complex in Bacillus subtilis
Brunet, Yannick R⋅Wang, Xindan and Rudner, David Z
PLoS genetics, vol. 15, (no. 8), pp. e1008296, 2019-Aug. | Journal Article
2018
In Vivo Evidence for ATPase-Dependent DNA Translocation by the Bacillus subtilis SMC Condensin Complex
Wang, Xindan⋅Wang, Xindan⋅Wang, Xindan⋅Hughes, Anna C⋅Hughes, Anna C⋅Hughes, Anna C⋅Brandão, Hugo B⋅Brandão, Hugo B⋅Brandão, Hugo B⋅Walker, Benjamin⋅Walker, Benjamin⋅Walker, Benjamin⋅Lierz, Carrie⋅Lierz, Carrie⋅Lierz, Carrie⋅Cochran, Jared C⋅Cochran, Jared C⋅Cochran, Jared C⋅Oakley, Martha G⋅Oakley, Martha G⋅Oakley, Martha G⋅Kruse, Andrew C⋅Kruse, Andrew C⋅Kruse, Andrew C⋅Rudner, David Z⋅Rudner, David Z and Rudner, David Z
Molecular Cell, vol. 71, (no. 5), pp. 847.e5, 2018-09-06. | Journal Article
2017
Bacillus subtilis SMC complexes juxtapose chromosome arms as they travel from origin to terminus
Wang, Xindan⋅Wang, Xindan⋅Wang, Xindan⋅Brandão, Hugo B⋅Brandão, Hugo B⋅Brandão, Hugo B⋅Le, Tung B K⋅Le, Tung B K⋅Le, Tung B K⋅Laub, Michael T⋅Laub, Michael T⋅Laub, Michael T⋅Rudner, David Z⋅Rudner, David Z and Rudner, David Z
Science (New York, N.Y.), vol. 355, (no. 6324), pp. 527, 2017-02-03. | Journal Article
 
Bacillus subtilis SMC complexes juxtapose chromosome arms as they travel from origin to terminus.(Author abstract)
Wang, Xindan⋅Wang, Xindan⋅Brandao, Hugo⋅Brandao, Hugo⋅Le, Tung⋅Le, Tung⋅Laub, Michael⋅Laub, Michael⋅Rudner, David and Rudner, David
Science, vol. 355, (no. 6324), pp. 524, 20170203. | Journal Article
 
The Bacillus subtilis germinant receptor GerA triggers premature germination in response to morphological defects during sporulation
Ramírez-Guadiana, Fernando H⋅Meeske, Alexander J⋅Wang, Xindan⋅Rodrigues, Christopher D. A and Rudner, David Z
Molecular Microbiology, vol. 105, (no. 5), pp. 704, 2017-09-00. | Journal Article
 
The nucleoid occlusion factor Noc controls DNA replication initiation in Staphylococcus aureus
Pang, Ting⋅Pang, Ting⋅Pang, Ting⋅Wang, Xindan⋅Wang, Xindan⋅Wang, Xindan⋅Lim, Hoong C⋅Lim, Hoong Chuin⋅Lim, Hoong C⋅Bernhardt, Thomas G⋅Bernhardt, Thomas G⋅Bernhardt, Thomas G⋅Rudner, David Z⋅Rudner, David Z and Rudner, David Z
PLoS genetics, vol. 13, (no. 7), pp. e1006908, 2017-Jul. | Journal Article
2016
GerM is required to assemble the basal platform of the SpoIIIA–SpoIIQ transenvelope complex during sporulation in Bacillus subtilis
Rodrigues, Christopher D A⋅Rodrigues, Christopher D. A⋅Ramírez‐Guadiana, Fernando H⋅Ramírez-Guadiana, Fernando H⋅Meeske, Alexander J⋅Meeske, Alexander J⋅Wang, Xindan⋅Wang, Xindan⋅Rudner, David Z and Rudner, David Z
Molecular Microbiology, vol. 102, (no. 2), pp. 273, October 2016. | Journal Article
 
Visualizing Bacillus subtilis During Vegetative Growth and Spore Formation
Wang, Xindan and Montero Llopis, Paula
Methods in molecular biology (Clifton, N.J.), vol. 1431, pp. 287, 2016-00-00. | Journal Article
2015
Condensin promotes the juxtaposition of DNA flanking its loading site in Bacillus subtilis
Wang, Xindan⋅Wang, Xindan⋅Wang, Xindan⋅Le, Tung B K⋅Le, Tung B K⋅Le, Tung B K⋅Lajoie, Bryan R⋅Lajoie, Bryan R⋅Lajoie, Bryan R⋅Dekker, Job⋅Dekker, Job⋅Dekker, Job⋅Laub, Michael T⋅Laub, Michael T⋅Laub, Michael T⋅Rudner, David Z⋅Rudner, David Z and Rudner, David Z
Genes & development, vol. 29, (no. 15), pp. 1675, 2015-Aug-01. | Journal Article
2014
Bacillus subtilis chromosome organization oscillates between two distinct patterns
Wang, Xindan⋅Wang, Xindan⋅Montero Llopis, Paula⋅Llopis, Paula⋅Rudner, David and Rudner, David Z
Proceedings of the National Academy of Sciences of the United States of America, vol. 111, (no. 35), pp. 12882, 20140902. | Journal Article