68 Publications (Page 3 of 3)
2017
A Human Proteome Array Approach to Identifying Key Host Proteins Targeted by Toxoplasma Kinase ROP18
Yang, Zhaoshou⋅Hou, Yongheng⋅Hao, Taofang⋅Rho, Hee-Sool⋅Wan, Jun⋅Luan, Yizhao⋅Gao, Xin⋅Yao, Jianping⋅Pan, Aihua⋅Xie, Zhi⋅Qian, Jiang⋅Liao, Wanqin⋅Zhu, Heng and Zhou, Xingwang
Molecular & cellular proteomics : MCP, vol. 16, (no. 3), pp. 484, 2017-03-00. | Journal Article
 
Assessing the model transferability for prediction of transcription factor binding sites based on chromatin accessibility
Liu, Sheng⋅Zibetti, Cristina⋅Wan, Jun⋅Wang, Guohua⋅Blackshaw, Seth and Qian, Jiang
BMC bioinformatics, vol. 18, (no. 1), pp. 355, 2017-Jul-27. | Journal Article
 
Methods of MicroRNA Promoter Prediction and Transcription Factor Mediated Regulatory Network
Zhao, Yuming⋅Wang, Fang⋅Chen, Su⋅Wan, Jun and Wang, Guohua
BioMed Research International, vol. 2017, pp. 8, 20170605. | Journal Article
 
Methylated cis-regulatory elements mediate KLF4-dependent gene transactivation and cell migration
Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Su, Yijing⋅Su, Yijing⋅Su, Yijing⋅Song, Qifeng⋅Song, Qifeng⋅Song, Qifeng⋅Tung, Brian⋅Tung, Brian⋅Tung, Brian⋅Oyinlade, Olutobi⋅Oyinlade, Olutobi⋅Oyinlade, Olutobi⋅Liu, Sheng⋅Liu, Sheng⋅Liu, Sheng⋅Ying, Mingyao⋅Ying, Mingyao⋅Ying, Mingyao⋅Ming, Guo-Li⋅Ming, Guo-Li⋅Ming, Guo-Li⋅Song, Hongjun⋅Song, Hongjun⋅Song, Hongjun⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Zhu, Heng⋅Zhu, Heng⋅Zhu, Heng⋅Xia, Shuli⋅Xia, Shuli and Xia, Shuli
eLife, vol. 6, 2017-05-29. | Journal Article
 
Polo-like kinase 1 (Plk1) overexpression enhances ionizing radiation-induced cancer formation in mice.
Li, Zhiguo⋅Liu, Jinghui⋅Li, Jie⋅Kong, Yifan⋅Sandusky, George⋅Rao, Xi⋅Liu, Yunlong⋅Wan, Jun and Liu, Xiaoqi
The Journal of biological chemistry, vol. 292, (no. 42), pp. 17461-17472, October 20, 2017. | Journal Article
 
The amino acid transporter SLC36A4 regulates the amino acid pool in retinal pigmented epithelial cells and mediates the mechanistic target of rapamycin, complex 1 signaling
Shang, Peng⋅Shang, Peng⋅Shang, Peng⋅Valapala, Mallika⋅Valapala, Mallika⋅Valapala, Mallika⋅Grebe, Rhonda⋅Grebe, Rhonda⋅Grebe, Rhonda⋅Hose, Stacey⋅Hose, Stacey⋅Hose, Stacey⋅Ghosh, Sayan⋅Ghosh, Sayan⋅Ghosh, Sayan⋅Bhutto, Imran A⋅Bhutto, Imran A⋅Bhutto, Imran A⋅Handa, James T⋅Handa, James T⋅Handa, James T⋅Lutty, Gerard A⋅Lutty, Gerard A⋅Lutty, Gerard A⋅Lu, Lixia⋅Lu, Lixia⋅Lu, Lixia⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Sergeev, Yuri⋅Sergeev, Yuri⋅Sergeev, Yuri⋅Puertollano, Rosa⋅Puertollano, Rosa⋅Puertollano, Rosa⋅Zigler, J. Samuel⋅Zigler, J Samuel⋅Zigler, J Samuel⋅Xu, Guo‐Tong⋅Xu, Guo-Tong⋅Xu, Guo-Tong⋅Sinha, Debasish⋅Sinha, Debasish and Sinha, Debasish
Aging Cell, vol. 16, (no. 2), pp. 359, April 2017. | Journal Article
2016
Off Target, but Sequence-Specific, shRNA-Associated Trans-Activation of Promoter Reporters in Transient Transfection Assays
Masuda, Tomohiro⋅Wan, Jun⋅Yerrabelli, Anitha⋅Berlinicke, Cindy⋅Kallman, Alyssa⋅Qian, Jiang and Zack, Donald J
PloS one, vol. 11, (no. 12), pp. e0167867, 2016-00-00. | Journal Article
 
Temporal patterns of gene expression during calyx of held development
Kolson, Douglas R⋅Kolson, Douglas R⋅Wan, Jun⋅Wan, Jun⋅Wu, Jonathan⋅Wu, Jonathan⋅Dehoff, Marlin⋅Dehoff, Marlin⋅Brandebura, Ashley N⋅Brandebura, Ashley N⋅Qian, Jiang⋅Qian, Jiang⋅Mathers, Peter H⋅Mathers, Peter H⋅Spirou, George A and Spirou, George A
Developmental Neurobiology, vol. 76, (no. 2), pp. 189, February 2016. | Journal Article
2015
Phosphoproteomic Profiling Reveals Epstein-Barr Virus Protein Kinase Integration of DNA Damage Response and Mitotic Signaling
Li, Renfeng⋅Li, Renfeng⋅Li, Renfeng⋅Liao, Gangling⋅Liao, Gangling⋅Liao, Gangling⋅Nirujogi, Raja Sekhar⋅Nirujogi, Raja S⋅Nirujogi, Raja Sekhar⋅Pinto, Sneha M⋅Pinto, Sneha M⋅Pinto, Sneha M⋅Shaw, Patrick G⋅Shaw, Patrick G⋅Shaw, Patrick G⋅Huang, Tai-Chung⋅Huang, Tai Chung⋅Huang, Tai-Chung⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Gowda, Harsha⋅Gowda, Harsha⋅Gowda, Harsha⋅Wu, Xinyan⋅Wu, Xinyan⋅Wu, Xinyan⋅Lv, Dong-Wen⋅Lv, Dong-Wen⋅Lv, Dong-Wen⋅Zhang, Kun⋅Zhang, Kun⋅Zhang, Kun⋅Manda, Srikanth S⋅Manda, Srikanth S⋅Manda, Srikanth S⋅Pandey, Akhilesh⋅Pandey, Akhilesh⋅Pandey, Akhilesh⋅Hayward, S D⋅Hayward, S Diane and Hayward, S Diane
PLoS pathogens, vol. 11, (no. 12), pp. e1005346, 2015-Dec. | Journal Article
 
Small-molecule–directed, efficient generation of retinal pigment epithelium from human pluripotent stem cells
Maruotti, Julien⋅Maruotti, Julien⋅Sripathi, Srinivas⋅Sripathi, Srinivas R⋅Bharti, Kapil⋅Bharti, Kapil⋅Fuller, John⋅Fuller, John⋅Wahlin, Karl⋅Wahlin, Karl J⋅Ranganathan, Vinod⋅Ranganathan, Vinod⋅Sluch, Valentin⋅Sluch, Valentin M⋅Berlinicke, Cynthia A⋅Berlinicke, Cynthia⋅Davis, Janine⋅Davis, Janine⋅Kim, Catherine⋅Kim, Catherine⋅Zhao, Lijun⋅Zhao, Lijun⋅Wan, Jun⋅Wan, Jun⋅Qian, Jiang⋅Qian, Jiang⋅Corneo, Barbara⋅Corneo, Barbara⋅Temple, Sally⋅Temple, Sally⋅Dubey, Ramin⋅Dubey, Ramin⋅Olenyuk, Bogdan Z⋅Olenyuk, Bogdan⋅Bhutto, Imran⋅Bhutto, Imran⋅Lutty, Gerard⋅Lutty, Gerard A⋅Zack, Donald and Zack, Donald J
Proceedings of the National Academy of Sciences of the United States of America, vol. 112, (no. 35), pp. 10955, 20150901. | Journal Article
2014
Transcription factor SOX9 plays a key role in the regulation of visual cycle gene expression in the retinal pigment epithelium.
Masuda, Tomohiro⋅Masuda, Tomohiro⋅Wahlin, Karl⋅Wahlin, Karl⋅Wan, Jun⋅Wan, Jun⋅Hu, Jianfei⋅Hu, Jianfei⋅Maruotti, Julien⋅Maruotti, Julien⋅Yang, Xue⋅Yang, Xue⋅Iacovelli, Jared⋅Iacovelli, Jared⋅Wolkow, Natalie⋅Wolkow, Natalie⋅Kist, Ralf⋅Kist, Ralf⋅Dunaief, Joshua L⋅Dunaief, Joshua L⋅Qian, Jiang⋅Qian, Jiang⋅Zack, Donald J⋅Zack, Don⋅Esumi, Noriko and Esumi, Noriko
The Journal of biological chemistry, vol. 289, (no. 18), pp. 12908-12921, May 2, 2014. | Journal Article
2013
A novel methyl-binding domain protein enrichment method for identifying genome-wide tissue-specific DNA methylation from nanogram DNA samples
Oliver, Verity F⋅Oliver, Verity F⋅Oliver, Verity F⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Agarwal, Saurabh⋅Agarwal, Saurabh⋅Agarwal, Saurabh⋅Zack, Donald J⋅Zack, Don⋅Zack, Donald J⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Merbs, Shannath L⋅Merbs, Shannath L and Merbs, Shannath L
Epigenetics & chromatin, vol. 6, (no. 1), pp. 17, 2013-Jun-07. | Journal Article
 
Computational Systems Biology
Xing-Ming, Zhao⋅Tian, Weidong⋅Jiang, Rui and Wan, Jun
The Scientific World Journal, 2013. | Journal Article
 
DNA methylation presents distinct binding sites for human transcription factors
Hu, Shaohui⋅Hu, Shaohui⋅Wan, Jun⋅Wan, Jun⋅Su, Yijing⋅Su, Yijing⋅Song, Qifeng⋅Song, Qifeng⋅Zeng, Yaxue⋅Zeng, Yaxue⋅Nguyen, Ha N⋅Nguyen, Ha Nam⋅Shin, Jaehoon⋅Shin, Jaehoon⋅Cox, Eric⋅Cox, Eric⋅Rho, Hee S⋅Rho, Hee Sool⋅Woodard, Crystal⋅Woodard, Crystal⋅Xia, Shuli⋅Xia, Shuli⋅Liu, Shuang⋅Liu, Shuang⋅Lyu, Huibin⋅Lyu, Huibin⋅Ming, Guo-Li⋅Ming, Guo-Li⋅Wade, Herschel⋅Wade, Herschel⋅Song, Hongjun⋅Song, Hongjun⋅Qian, Jiang⋅Qian, Jiang⋅Zhu, Heng and Zhu, Heng
eLife, vol. 2, pp. e00726, 2013-Sep-03. | Journal Article
 
Profiling the Dynamics of a Human Phosphorylome Reveals New Components in HGF/c-Met Signaling
Woodard, Crystal L⋅Woodard, Crystal L⋅Woodard, Crystal L⋅Woodard, Crystal L⋅Goodwin, C Rory⋅Goodwin, C Rory⋅Goodwin, C Rory⋅Goodwin, C Rory⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Xia, Shuli⋅Xia, Shuli⋅Xia, Shuli⋅Xia, Shuli⋅Newman, Robert⋅Newman, Robert⋅Newman, Robert⋅Newman, Robert⋅Hu, Jianfei⋅Hu, Jianfei⋅Hu, Jianfei⋅Hu, Jianfei⋅Zhang, Jin⋅Zhang, Jin⋅Zhang, Jin⋅Zhang, Jin⋅Hayward, S Diane⋅Hayward, S Diane⋅Hayward, S Diane⋅Hayward, S Diane⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Laterra, John⋅Laterra, John⋅Laterra, John⋅Laterra, John⋅others⋅Zhu, Heng⋅Zhu, Heng and Zhu, Heng
PloS one, vol. 8, (no. 9), pp. e72671, 2013-00-00. | Journal Article
2012
Cell-Specific DNA Methylation Patterns of Retina-Specific Genes
Merbs, Shannath L⋅Merbs, Shannath L⋅Khan, Miriam A⋅Khan, Miriam A⋅Hackler, Laszlo⋅Hackler, Jr, Laszlo⋅Oliver, Verity F⋅Oliver, Verity F⋅Wan, Jun⋅Wan, Jun⋅Qian, Jiang⋅Qian, Jiang⋅Zack, Don and Zack, Donald J
PloS one, vol. 7, (no. 3), pp. e32602, 2012-00-00. | Journal Article
 
Phosphorylation of the Chromatin Binding Domain of KSHV LANA
Woodard, Crystal⋅Woodard, C.⋅Woodard, Crystal⋅Woodard, Crystal⋅Woodard, Crystal⋅Shamay, Meir⋅Shamay, Meir⋅Shamay, M.⋅Shamay, Meir⋅Shamay, Meir⋅Liao, Gangling⋅Liao, G.⋅Liao, Gangling⋅Liao, Gangling⋅Liao, Gangling⋅Zhu, Jian⋅Zhu, Jian⋅Zhu, Jian⋅Zhu, J.⋅Zhu, Jian⋅Ng, A.N.⋅Ng, Ai N⋅Ng, Ai N⋅Ng, Ai Na⋅Ng, Ai N⋅Li, Renfeng⋅Li, Renfeng⋅Li, Renfeng⋅Li, R.⋅Li, Renfeng⋅Newman, R.⋅Newman, Rob⋅Newman, Rob⋅Newman, Rob⋅Newman, Rob⋅Rho, H.-S.⋅Rho, Hee-Sool⋅Rho, Hee-Sool⋅Rho, Hee-Sool⋅Rho, Hee-Sool⋅Hu, Jianfei⋅Hu, Jianfei⋅Hu, Jianfei⋅Hu, J.⋅Hu, Jianfei⋅Wan, J.⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Wan, Jun⋅Qian, J.⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Qian, Jiang⋅Zhu, Heng⋅Zhu, H.⋅Zhu, Heng⋅Zhu, Heng⋅Zhu, Heng⋅Hayward, S. D⋅Hayward, S D⋅Hayward, S D⋅Hayward, S Diane and Hayward, S.D.
PLoS pathogens, vol. 8, (no. 10), pp. e1002972, 2012-00-00. | Journal Article
2009
Relating periodicity of nucleosome organization and gene regulation
Wan, Jun⋅Wan, Jun⋅Lin, Jimmy⋅Lin, Jimmy⋅Zack, Don⋅Zack, Donald J⋅Qian, Jiang and Qian, Jiang
Bioinformatics, vol. 25, (no. 14), pp. 1788, 20090715. | Journal Article