68 Publications (Page 2 of 3)
2010
Peptide de novo sequencing using 157 nm photodissociation in a tandem time-of-flight mass spectrometer.
Zhang, Liangyi⋅Zhang, Liangyi⋅Reilly, James P and Reilly, James P
Analytical chemistry, vol. 82, (no. 3), pp. 898-908, 2010/Feb/1. | Journal Article
 
Variation of the chemical reactivity of Thermus thermophilus HB8 ribosomal proteins as a function of pH
Running, William E and Reilly, James P
Proteomics, vol. 10, (no. 20), pp. 3669-3687, 2010. | Journal Article
2009
B. subtilis ribosomal proteins: structural homology and post-translational modifications.
Lauber, Matthew A⋅Running, William E and Reilly, James P
Journal of proteome research, vol. 8, (no. 9), pp. 4193-206, 2009/Sep. | Journal Article
 
Correlating the chemical modification of Escherichia coli ribosomal proteins with crystal structure data.
Liu, Xiaohui and Reilly, James P
Journal of proteome research, vol. 8, (no. 10), pp. 4466-78, 2009/Oct. | Journal Article
 
Development of a linear ion trap/orthogonal-time-of-flight mass spectrometer for time-dependent observation of product ions by ultraviolet photodissociation of peptide ions.
Kim, Tae-Young⋅Schwartz, Jae C and Reilly, James P
Analytical chemistry, vol. 81, (no. 21), pp. 8809-17, 2009/Nov/1. | Journal Article
 
Extracting both peptide sequence and glycan structural information by 157 nm photodissociation of N-linked glycopeptides.
Zhang, Liangyi and Reilly, James P
Journal of proteome research, vol. 8, (no. 2), pp. 734-42, 2009/Feb. | Journal Article
 
Peptide photodissociation with 157 nm light in a commercial tandem time-of-flight mass spectrometer.
Zhang, Liangyi and Reilly, James P
Analytical chemistry, vol. 81, (no. 18), pp. 7829-38, 2009/Sep/15. | Journal Article
 
Radical-driven dissociation of odd-electron peptide radical ions produced in 157 nm photodissociation.
Zhang, Liangyi and Reilly, James P
Journal of the American Society for Mass Spectrometry, vol. 20, (no. 7), pp. 1378-90, 2009/Jul. | Journal Article
 
Ribosomal proteins of Deinococcus radiodurans: their solvent accessibility and reactivity.
Running, William E and Reilly, James P
Journal of proteome research, vol. 8, (no. 3), pp. 1228-46, 2009/Mar. | Journal Article
 
Time-resolved observation of product ions generated by 157 nm photodissociation of singly protonated phosphopeptides.
Kim, Tae-Young and Reilly, James P
Journal of the American Society for Mass Spectrometry, vol. 20, (no. 12), pp. 2334-41, 2009/Dec. | Journal Article
 
Ultraviolet photofragmentation of biomolecular ions
Reilly, James P
Mass spectrometry reviews., vol. 28, (no. 3), pp. 425-447, 2009. | Journal Article
2008
Analysis of methylation, acetylation, and other modifications in bacterial ribosomal proteins.
Arnold, Randy J⋅Running, William and Reilly, James P
Methods in molecular biology (Clifton, N.J.), vol. 446, pp. 151-61, 2008. | Journal Article
 
Does a Charge Tag Really Provide a Fixed Charge
He, Yi and Reilly, James P
Angewandte Chemie., vol. 47, (no. 13), pp. 2463-2465, 2008. | Journal Article
 
Fast and accurate identification of semi-tryptic peptides in shotgun proteomics
Alves, Pedro⋅Arnold, Randy J⋅Clemmer, David E⋅Li, Yixue⋅Reilly, James P⋅Sheng, Quanhu⋅Tang, Haixu⋅Xun, Zhiyin⋅Zeng, Rong and Radivojac, Predrag
Bioinformatics, vol. 24, (no. 1), pp. 102-9, Jan 1, 2008. | Journal Article
 
Identification of isomeric N-glycan structures by mass spectrometry with 157 nm laser-induced photofragmentation.
Devakumar, Arugadoss⋅Mechref, Yehia⋅Kang, Pilsoo⋅Novotny, Milos V and Reilly, James P
Journal of the American Society for Mass Spectrometry, vol. 19, (no. 7), pp. 1027-40, 2008/Jul. | Journal Article
 
Structural Analysis of Leukotriene C4 Isomers Using Collisional Activation and 157 nm Photodissociation
Devakumar, Arugadoss⋅O'Dell, David K⋅Walker, J. M and Reilly, James P
Journal of the American Society for Mass Spectrometry, vol. 19, (no. 1), pp. 14-26, 2008. | Journal Article
 
Use of 157-nm photodissociation to probe structures of y- and b-type ions produced in collision-induced dissociation of peptide ions.
Zhang, Liangyi and Reilly, James P
Journal of the American Society for Mass Spectrometry, vol. 19, (no. 5), pp. 695-702, 2008/May. | Journal Article
2007
A top-down/bottom-up study of the ribosomal proteins of Caulobacter crescentus.
Running, William E⋅Running, William E⋅Ravipaty, Shobha⋅Ravipaty, Shobha⋅Karty, Jonathan A⋅Karty, Jonathan A⋅Reilly, James P and Reilly, James P
Journal of proteome research, vol. 6, (no. 1), pp. 337-47, 2007/Jan. | Journal Article
 
Factors That Impact the Vacuum Ultraviolet Photofragmentation of Peptide Ions
Thompson, Matthew S⋅Cui, Weidong and Reilly, James P
Journal of the American Society for Mass Spectrometry, vol. 18, (no. 8), pp. 1439-1452, 2007. | Journal Article
 
Laser-induced photofragmentation of neutral and acidic glycans inside an ion-trap mass spectrometer.
Devakumar, Arugadoss⋅Mechref, Yehia⋅Kang, Pilsoo⋅Novotny, Milos V and Reilly, James P
Rapid communications in mass spectrometry : RCM, vol. 21, (no. 8), pp. 1452-60, 2007. | Journal Article
 
Probing the structure and activity of trypsin with amidination.
Liu, Xiaohui⋅Broshears, William C and Reilly, James P
Analytical biochemistry, vol. 367, (no. 1), pp. 13-9, 2007/Aug/1. | Journal Article
 
Two dimensional liquid phase separations of proteins using online fractionation and concentration between chromatographic dimensions.
Karty, Jonathan A⋅Karty, Jonathan A⋅Running, William E⋅Running, William E⋅Reilly, James P and Reilly, James P
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, vol. 847, (no. 2), pp. 103-13, 2007/Mar/1. | Journal Article
2006
A computational approach toward label-free protein quantification using predicted peptide detectability
Tang, Haixu⋅Tang, Haixu⋅Arnold, Randy J⋅Arnold, Randy J⋅Alves, Pedro⋅Alves, Pedro⋅Xun, Zhiyin⋅Xun, Zhiyin⋅Clemmer, David E⋅Clemmer, David E⋅Novotny, Milos V⋅Novotny, Milos V⋅Reilly, James P⋅Reilly, James P⋅Radivojac, Predrag and Radivojac, Predrag
Bioinformatics, vol. 22, (no. 14), pp. e481, Jul 15, 2006. | Journal Article
 
A nutrient uptake role for bacterial cell envelope extensions
Wagner, Jennifer K⋅Herman, Jennifer K⋅Setayeshgar, Sima⋅Sharon, Laura A⋅Reilly, James P and Brun, Yves V
Proceedings of the National Academy of Sciences of the United States of America, vol. 103, (no. 31), pp. 11772, Aug 1, 2006. | Journal Article
 
Probing the structure of the Caulobacter crescentus ribosome with chemical labeling and mass spectrometry.
Beardsley, Richard L⋅Running, William E and Reilly, James P
Journal of proteome research, vol. 5, (no. 11), pp. 2935-46, 2006/Nov. | Journal Article